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THAPSDRAFT_268054 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

Gene ID: 7443107, updated on 21-Dec-2023

Summary

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Gene symbol
THAPSDRAFT_268054
Gene description
hypothetical protein
Locus tag
THAPSDRAFT_268054
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_012064.1 (1773666..1775177, complement)

Chromosome 1 - NC_012064.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene amino acid transport system Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012064.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
  2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_002286845.1
  • supported by Thalassiosira cDNAs; putative protein with no similarity

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012064.1 Reference assembly

    Range
    1773666..1775177 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002286809.1 → XP_002286845.1  hypothetical protein THAPSDRAFT_268054 [Thalassiosira pseudonana CCMP1335]

    See identical proteins and their annotated locations for XP_002286845.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B8BR77
    Conserved Domains (1) summary
    cl19288
    Location:17 → 435
    TMEM144; Transmembrane family, TMEM144 of transporters
Nucleotide Protein
Heading Accession and Version

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