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Tmem43 transmembrane protein 43 [ Mus musculus (house mouse) ]

Gene ID: 74122, updated on 3-Apr-2016
Official Symbol
Tmem43provided by MGI
Official Full Name
transmembrane protein 43provided by MGI
Primary source
MGI:MGI:1921372
See related
Ensembl:ENSMUSG00000030095 Vega:OTTMUSG00000023824
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
LUMA; 1200015A22Rik
Orthologs
Location:
6; 6 D2
Exon count:
12
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 6 NC_000072.6 (91473751..91488458)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (91423745..91438452)

Chromosome 6 - NC_000072.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 1810044D09 gene Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 4 Neighboring gene xeroderma pigmentosum, complementation group C Neighboring gene LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 
  • Targeted (2) 
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
protein self-association IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
nuclear membrane organization IDA
Inferred from Direct Assay
more info
PubMed 
nuclear membrane organization ISO
Inferred from Sequence Orthology
more info
PubMed 
Component Evidence Code Pubs
Golgi apparatus ISO
Inferred from Sequence Orthology
more info
 
endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 
endoplasmic reticulum lumen IDA
Inferred from Direct Assay
more info
PubMed 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of nuclear inner membrane IDA
Inferred from Direct Assay
more info
PubMed 
membrane IEA
Inferred from Electronic Annotation
more info
 
nuclear inner membrane IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_028766.2NP_083042.1  transmembrane protein 43

    See identical proteins and their annotated locations for NP_083042.1

    Status: PROVISIONAL

    Source sequence(s)
    AK004778
    Consensus CDS
    CCDS20368.1
    UniProtKB/Swiss-Prot
    Q9DBS1
    Related
    ENSMUSP00000032183, OTTMUSP00000028164, ENSMUST00000032183, OTTMUST00000058195
    Conserved Domains (1) summary
    pfam07787
    Location:121373
    DUF1625; Protein of unknown function (DUF1625)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000072.6 Reference GRCm38.p3 C57BL/6J

    Range
    91473751..91488458
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000028.1 Alternate Mm_Celera

    Range
    93367030..93381749
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)