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    rfbF glucose-1-phosphate cytidylyltransferase [ Agrobacterium vitis S4 ]

    Gene ID: 7388676, updated on 11-May-2013
    Gene symbol
    rfbF
    Gene description
    glucose-1-phosphate cytidylyltransferase
    Locus tag
    Avi_0626
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Agrobacterium vitis S4 (strain: S4; ATCC BAA-846, isolate: Kecskemet-Hungary, nat-host: Vitis vinifera cv. 'Izsaki Sarfeher', culture-collection: ATCC:BAA-846)
    Lineage
    Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium
    Location :
    chromosome: 1, country: Hungary: Orgovany
    Sequence :
    Chromosome: 1; NC_011989.1 (544304..545074)

    Chromosome 1 - NC_011989.1Genomic Context describing neighboring genes Neighboring gene large conductance mechanosensitive channel protein Neighboring gene aspartate aminotransferase Neighboring gene CDP-glucose 4,6-dehydratase Neighboring gene dTDP-4-dehydrorhamnose 3,5-epimerase Neighboring gene hypothetical protein Neighboring gene glycosyltransferase

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Genome sequences of three agrobacterium biovars help elucidate the evolution of multichromosome genomes in bacteria. Slater SC, et al. J Bacteriol, 2009 Apr. PMID 19251847.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    glucose-1-phosphate cytidylyltransferase

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_011989.1

      Range
      544304..545074
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_002548450.1 glucose-1-phosphate cytidylyltransferase [Agrobacterium vitis S4]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B9JR33
      Conserved Domains (2) summary
      COG1208
      Location:1 – 256
      Blast Score: 484
      GCD1; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure ...
      cd02524
      Location:3 – 254
      Blast Score: 1154
      G1P_cytidylyltransferase; G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose.
    Nucleotide Protein
    Heading Accession and Version
    genomic CP000633.1 ACM35446.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

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