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SFMBT2 Scm like with four mbt domains 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 738722, updated on 29-Mar-2024

Summary

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Official Symbol
SFMBT2provided by VGNC
Official Full Name
Scm like with four mbt domains 2provided by VGNC
Primary source
VGNC:VGNC:48924
Locus tag
CK820_G0036065
See related
Ensembl:ENSPTRG00000002271
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 8 NC_072406.2 (19998130..20252743, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 10 NC_072408.1 (10330676..10585650, complement)

Chromosome 8 - NC_072406.2Genomic Context describing neighboring genes Neighboring gene endogenous retrovirus group K member 16 Rec protein Neighboring gene uncharacterized LOC134807128 Neighboring gene uncharacterized LOC129136245 Neighboring gene uncharacterized LOC134807129 Neighboring gene U6 spliceosomal RNA Neighboring gene inter-alpha-trypsin inhibitor heavy chain 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
scm-like with four MBT domains protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072406.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    19998130..20252743 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063780421.1 → XP_063636491.1  scm-like with four MBT domains protein 2 isoform X1

  2. XM_063780426.1 → XP_063636496.1  scm-like with four MBT domains protein 2 isoform X5

  3. XM_063780429.1 → XP_063636499.1  scm-like with four MBT domains protein 2 isoform X5

  4. XM_063780425.1 → XP_063636495.1  scm-like with four MBT domains protein 2 isoform X5

  5. XM_054660687.2 → XP_054516662.2  scm-like with four MBT domains protein 2 isoform X1

  6. XM_063780428.1 → XP_063636498.1  scm-like with four MBT domains protein 2 isoform X5

  7. XM_063780422.1 → XP_063636492.1  scm-like with four MBT domains protein 2 isoform X1

  8. XM_063780427.1 → XP_063636497.1  scm-like with four MBT domains protein 2 isoform X5

  9. XM_024346182.3 → XP_024201950.3  scm-like with four MBT domains protein 2 isoform X2

  10. XM_063780424.1 → XP_063636494.1  scm-like with four MBT domains protein 2 isoform X4

  11. XM_063780423.1 → XP_063636493.1  scm-like with four MBT domains protein 2 isoform X3

Nucleotide Protein
Heading Accession and Version

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