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KDF1 keratinocyte differentiation factor 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 737621, updated on 29-Mar-2024

Summary

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Official Symbol
KDF1provided by VGNC
Official Full Name
keratinocyte differentiation factor 1provided by VGNC
Primary source
VGNC:VGNC:1285
Locus tag
CK820_G0045768
See related
Ensembl:ENSPTRG00000000396
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
C1H1orf172
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (204021897..204032809)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (27266485..27277397, complement)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene oligosaccharyltransferase complex subunit OSTC Neighboring gene large ribosomal subunit protein eL32-like Neighboring gene nuclear distribution C, dynein complex regulator Neighboring gene nuclear receptor subfamily 0 group B member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in keratinocyte development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of epidermal cell division IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
keratinocyte differentiation factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    204021897..204032809
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016957041.3 → XP_016812530.1  keratinocyte differentiation factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A2J8JNW0, A0A6D2XHT2, H2PYE8
    Conserved Domains (1) summary
    pfam15551
    Location:48 → 398
    DUF4656; Domain of unknown function (DUF4656)

  2. XM_054664404.2 → XP_054520379.1  keratinocyte differentiation factor 1 isoform X1

  3. XM_001146912.6 → XP_001146912.1  keratinocyte differentiation factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A2J8JNW0, A0A6D2XHT2, H2PYE8
    Related
    ENSPTRP00000000696.4
    Conserved Domains (1) summary
    pfam15551
    Location:48 → 398
    DUF4656; Domain of unknown function (DUF4656)

  4. XM_054664396.2 → XP_054520371.1  keratinocyte differentiation factor 1 isoform X1

  5. XM_054664412.1 → XP_054520387.1  keratinocyte differentiation factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A2J8JNW0, A0A6D2XHT2, H2PYE8

  6. XM_063784025.1 → XP_063640095.1  keratinocyte differentiation factor 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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