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    UCHL1 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) [ Homo sapiens (human) ]

    Gene ID: 7345, updated on 19-May-2013
    Official Symbol
    UCHL1provided by HGNC
    Official Full Name
    ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)provided by HGNC
    Primary source
    HGNC:12513
    See related
    Ensembl:ENSG00000154277; HPRD:01877; MIM:191342; Vega:OTTHUMG00000099377
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    PARK5; PGP95; PGP9.5; Uch-L1; PGP 9.5
    Summary
    The protein encoded by this gene belongs to the peptidase C12 family. This enzyme is a thiol protease that hydrolyzes a peptide bond at the C-terminal glycine of ubiquitin. This gene is specifically expressed in the neurons and in cells of the diffuse neuroendocrine system. Mutations in this gene may be associated with Parkinson disease.[provided by RefSeq, Sep 2009]
    Location :
    4p14
    Sequence :
    Chromosome: 4; NC_000004.11 (41258898..41270446)
    See UCHL1 in Epigenomics, MapViewer

    Chromosome 4 - NC_000004.11Genomic Context describing neighboring genes Neighboring gene NOP2/Sun domain family, member 7 Neighboring gene ADP-ribosylation factor-like 4 pseudogene 2 Neighboring gene amyloid beta (A4) precursor protein-binding, family B, member 2 Neighboring gene LIM and calponin homology domains 1 Neighboring gene ribosomal protein L12 pseudogene 20 Neighboring gene olfactory receptor, family 5, subfamily M, member 14 pseudogene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Parkinson disease 5

    Summary from GeneReviews: Parkinson Disease Overview Go to GeneReviews

    Disease Characteristics
    Parkinsonism refers to all clinical states characterized by tremor, muscle rigidity, and slowed movement (bradykinesia). Parkinson disease is the primary and most common form of parkinsonism. Psychiatric manifestations, which include depression and visual hallucinations, are common but not uniformly present. Dementia eventually occurs in at least 20% of cases. Generally, individuals with onset before age 20 years are considered to have juvenile-onset Parkinson disease, those with onset before age 50 years are classified as having early-onset Parkinson disease, and those with onset after age 50 years are considered to have late-onset Parkinson disease.
    Diagnosis Testing
    The diagnosis of Parkinson disease is based solely on the clinical findings of tremor, rigidity, and bradykinesia. A good response to levodopa and asymmetric onset of limb involvement are generally regarded as supporting diagnostic features. The cardinal pathologic feature of Parkinson disease is the loss of dopaminergic neurons in the substantia nigra with intracytoplasmic inclusions (Lewy bodies) in the remaining, intact nigral neurons. The genetic cause of some forms of Parkinson disease has been identified. Seven disease genes have been implicated. Mutations in three known genes, SNCA (PARK1), UCHL1 (PARK5), and LRRK2 (PARK8) and one mapped gene (PARK3) result in autosomal dominant Parkinson disease. Mutations in three known genes, PARK2 (PARK2), PARK7 (PARK7), and PINK1 (PARK6), result in autosomal recessive Parkinson disease. Three susceptibility genes have been identified. Molecular genetic testing is clinically available for PARK2 (the gene encoding parkin), PINK1, PARK7, SNCA, and LRRK2.
    Genetic Counseling
    Parkinson disease can be inherited in an autosomal dominant or autosomal recessive manner; however, most cases of Parkinson disease are thought to result from the effects of multiple genes as well as environmental risk factors. Genetic counseling of affected individuals and their family members must be done on a family-by-family basis. The risk to first-degree relatives of a person with Parkinson disease varies from study to study and from country to country. In families with a non-mendelian form of Parkinson disease, first-degree relatives of an affected individual are between 2.7 and 3.5 times more likely to develop Parkinson disease than individuals without a family history of Parkinson disease. Their cumulative lifetime risk of developing Parkinson disease is therefore between 3% and 7%.
    References
    Protein Gene Interaction Pubs
    Envelope surface glycoprotein gp120 env HIV-1 gp120 upregulates the expression of ubiquitin carboxyl-terminal esterase L1 (UCH-L1) in umbilical cord blood mononuclear cells and T-cell lines PubMed

    Go to the HIV-1, Human Protein Interaction Database

    Products Interactant Other Gene Complex Source Pubs Description
    P09936 P83916 CBX1    HPRD  PubMed  
    P09936 P46527 CDKN1B    HPRD  PubMed  
    P09936 Q92905 COPS5    HPRD  PubMed  
    P09936 P07900 HSP90AA1    HPRD  PubMed  
    P09936 P11142 HSPA8    HPRD  PubMed  
    P09936 P13473 LAMP2    HPRD  PubMed  
    P09936 Q15843 NEDD8    HPRD  PubMed  
    P09936 Q96S59 RANBP9    HPRD  PubMed  
    P09936 P62988 UBB    HPRD  PubMed  
    P09936 P63279 UBE2I    HPRD  PubMed  
    BioGRID:113192 BioGRID:106659 ADRA2A    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex; Two-hybrid 
    BioGRID:113192 BioGRID:106660 ADRA2B    BioGRID  PubMed Reconstituted Complex 
    BioGRID:113192 BioGRID:106661 ADRA2C    BioGRID  PubMed Reconstituted Complex 
    BioGRID:113192 BioGRID:106663 ADRB2    BioGRID  PubMed Reconstituted Complex 
    BioGRID:113192 BioGRID:106710 AKT1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:113192 BioGRID:116151 CBX1    BioGRID  PubMed Two-hybrid 
    BioGRID:113192 BioGRID:122281 CCDC14    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:113192 BioGRID:107452 CDK2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:113192 BioGRID:107461 CDKN1B    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:113192 BioGRID:107463 CDKN2A    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:113192 BioGRID:116183 COPS5    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:113192 BioGRID:107880 CTNNB1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:113192 BioGRID:108009 DDB1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:113192 BioGRID:108276 EGFR    BioGRID  PubMed PCA 
    BioGRID:113192 BioGRID:109552 HSP90AA1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:113192 BioGRID:109544 HSPA8    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:113192 BioGRID:115015 IQCB1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:113192 BioGRID:110070 KRT17    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:113192 BioGRID:110049 KRT4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:113192 BioGRID:110114 LAMP2    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:113192 BioGRID:110358 MDM2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:113192 BioGRID:110764 NCAM1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:113192 BioGRID:110815 NEDD8    BioGRID  PubMed Two-hybrid 
    BioGRID:113192 BioGRID:111337 PLA2G2A    BioGRID  PubMed Biochemical Activity 
    BioGRID:113192 BioGRID:115359 RANBP9    BioGRID  PubMed Two-hybrid 
    BioGRID:113192 BioGRID:121582 RPTOR    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:113192 BioGRID:112490 SMN1    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity 
    BioGRID:113192 BioGRID:119942 TERF2IP    BioGRID  PubMed Two-hybrid 
    BioGRID:113192 BioGRID:117660 TINF2    BioGRID  PubMed Two-hybrid 
    BioGRID:113192 BioGRID:113010 TP53    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:113192 BioGRID:121415 TRIM54    BioGRID  PubMed Biochemical Activity 
    BioGRID:113192 BioGRID:124195 TRIM63    BioGRID  PubMed Biochemical Activity 
    BioGRID:113192 BioGRID:113603 TUBA1A    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:113192 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western; Biochemical Activity; Co-crystal Structure; Reconstituted Complex; Two-hybrid 
    BioGRID:113192 BioGRID:113177 UBE2I    BioGRID  PubMed Two-hybrid 
    BioGRID:113192 BioGRID:115283 USP15    BioGRID  PubMed Biochemical Activity 
    BioGRID:113192 BioGRID:117950 USP21    BioGRID  PubMed Affinity Capture-MS; Biochemical Activity 
    BioGRID:113192 BioGRID:121683 USP28    BioGRID  PubMed Biochemical Activity 
    BioGRID:113192 BioGRID:123245 WDR82    BioGRID  PubMed Co-fractionation 

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    alpha-2A adrenergic receptor binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    cysteine-type endopeptidase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    ligase activity IEA
    Inferred from Electronic Annotation
    more info
     
    omega peptidase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    ubiquitin binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    ubiquitin thiolesterase activity TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    adult walking behavior IEA
    Inferred from Electronic Annotation
    more info
     
    axon target recognition IEA
    Inferred from Electronic Annotation
    more info
     
    axon transport of mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     
    cell death IEA
    Inferred from Electronic Annotation
    more info
     
    cell proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    eating behavior IEA
    Inferred from Electronic Annotation
    more info
     
    muscle fiber development IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of MAP kinase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    neuromuscular process IEA
    Inferred from Electronic Annotation
    more info
     
    protein deubiquitination IDA
    Inferred from Direct Assay
    more info
    PubMed 
    response to stress IEA
    Inferred from Electronic Annotation
    more info
     
    sensory perception of pain IEA
    Inferred from Electronic Annotation
    more info
     
    ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    axon IEA
    Inferred from Electronic Annotation
    more info
     
    cytoplasm IDA
    Inferred from Direct Assay
    more info
     
    cytoplasm ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    cytoplasm TAS
    Traceable Author Statement
    more info
    PubMed 
    cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    neuronal cell body IEA
    Inferred from Electronic Annotation
    more info
     
    NOT nucleolus IDA
    Inferred from Direct Assay
    more info
     
    nucleus IDA
    Inferred from Direct Assay
    more info
     
    colocalizes_with plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Preferred Names
    ubiquitin carboxyl-terminal hydrolase isozyme L1
    Names
    ubiquitin carboxyl-terminal hydrolase isozyme L1
    ubiquitin thioesterase L1
    neuron cytoplasmic protein 9.5
    ubiquitin C-terminal hydrolase
    NP_004172.2

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_012931.1 RefSeqGene

      Range
      5001..16549
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_004181.4NP_004172.2  ubiquitin carboxyl-terminal hydrolase isozyme L1

      Status: REVIEWED

      Source sequence(s)
      BC000332, BP202166
      Consensus CDS
      CCDS3462.1
      UniProtKB/Swiss-Prot
      P09936
      Related
      ENSP00000284440, OTTHUMP00000125219, ENST00000284440, OTTHUMT00000216827
      Conserved Domains (1) summary
      cd09616
      Location:5219
      Blast Score: 828
      Peptidase_C12_UCH_L1_L3; Cysteine peptidase C12 containing ubiquitin carboxyl-terminal hydrolase (UCH) families L1 and L3

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000004.11 Reference GRCh37.p10 Primary Assembly

      Range
      41258898..41270446
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000136.1 Alternate HuRef

      Range
      40580844..40592391
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018915.1 Alternate CHM1_1.0

      Range
      41148920..41160467
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

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