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Setd7 SET domain containing (lysine methyltransferase) 7 [ Mus musculus (house mouse) ]

Gene ID: 73251, updated on 28-May-2016
Official Symbol
Setd7provided by MGI
Official Full Name
SET domain containing (lysine methyltransferase) 7provided by MGI
Primary source
MGI:MGI:1920501
See related
Ensembl:ENSMUSG00000037111 Vega:OTTMUSG00000017099
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
KMT7; Set7; H3K4MT; Set7/9; mKIAA1717; 1600028F23Rik
Orthologs
Location:
3; 3 C
Exon count:
8
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 3 NC_000069.6 (51515318..51560823, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (51319240..51364745, complement)

Chromosome 3 - NC_000069.6Genomic Context describing neighboring genes Neighboring gene RAB33B, member RAS oncogene family Neighboring gene RIKEN cDNA 5031434O11 gene Neighboring gene predicted gene, 36008 Neighboring gene microsomal glutathione S-transferase 2 Neighboring gene mastermind like 3 (Drosophila) Neighboring gene predicted gene, 36068

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
chromatin binding ISO
Inferred from Sequence Orthology
more info
 
histone-lysine N-methyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
p53 binding ISO
Inferred from Sequence Orthology
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein-lysine N-methyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
cellular response to DNA damage stimulus ISO
Inferred from Sequence Orthology
more info
PubMed 
chromatin modification IEA
Inferred from Electronic Annotation
more info
 
heterochromatin organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
heterochromatin organization ISO
Inferred from Sequence Orthology
more info
PubMed 
histone lysine methylation IEA
Inferred from Electronic Annotation
more info
 
methylation IEA
Inferred from Electronic Annotation
more info
 
negative regulation of transferase activity IDA
Inferred from Direct Assay
more info
PubMed 
peptidyl-lysine dimethylation ISO
Inferred from Sequence Orthology
more info
 
peptidyl-lysine methylation IDA
Inferred from Direct Assay
more info
PubMed 
peptidyl-lysine monomethylation ISO
Inferred from Sequence Orthology
more info
 
positive regulation of transcription, DNA-templated ISO
Inferred from Sequence Orthology
more info
 
regulation of histone H3-K9 methylation IDA
Inferred from Direct Assay
more info
PubMed 
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
chromosome IEA
Inferred from Electronic Annotation
more info
 
nucleolus ISO
Inferred from Sequence Orthology
more info
 
nucleus ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
histone-lysine N-methyltransferase SETD7
Names
H3-K4 methyltransferase
H3-K4-HMTase SETD7
SET domain-containing protein 7
histone H3-K4 methyltransferase SETD7
NP_542983.3

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_080793.5NP_542983.3  histone-lysine N-methyltransferase SETD7

    See identical proteins and their annotated locations for NP_542983.3

    Status: PROVISIONAL

    Source sequence(s)
    AC102860
    Consensus CDS
    CCDS17341.1
    UniProtKB/Swiss-Prot
    Q8VHL1
    Related
    ENSMUSP00000043492, OTTMUSP00000018581, ENSMUST00000037141, OTTMUST00000041418
    Conserved Domains (1) summary
    pfam00856
    Location:227336
    SET; SET domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000069.6 Reference GRCm38.p3 C57BL/6J

    Range
    51515318..51560823 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000025.1 Alternate Mm_Celera

    Range
    51246288..51292035 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)