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Xpot exportin, tRNA (nuclear export receptor for tRNAs) [ Mus musculus (house mouse) ]

Gene ID: 73192, updated on 8-May-2016
Official Symbol
Xpotprovided by MGI
Official Full Name
exportin, tRNA (nuclear export receptor for tRNAs)provided by MGI
Primary source
MGI:MGI:1920442
See related
Ensembl:ENSMUSG00000034667
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
C79645; AI452076; EXPORTIN-T; 1110004L07Rik; 3110065H13Rik
Orthologs
Location:
10; 10 D3
Exon count:
25
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 10 NC_000076.6 (121587380..121626316, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (121024436..121063372, complement)

Chromosome 10 - NC_000076.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 35696 Neighboring gene TANK-binding kinase 1 Neighboring gene predicted gene, 35816 Neighboring gene RIKEN cDNA D930020B18 gene Neighboring gene predicted gene, 35865

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 
  • RNA transport, organism-specific biosystem (from KEGG)
    RNA transport, organism-specific biosystemRNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) ...
  • RNA transport, conserved biosystem (from KEGG)
    RNA transport, conserved biosystemRNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) ...
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
RNA binding IEA
Inferred from Electronic Annotation
more info
 
Ran GTPase binding IBA
Inferred from Biological aspect of Ancestor
more info
 
nucleobase-containing compound transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
tRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
tRNA binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 
tRNA export from nucleus ISO
Inferred from Sequence Orthology
more info
 
tRNA re-export from nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cell IBA
Inferred from Biological aspect of Ancestor
more info
 
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
intracellular IBA
Inferred from Biological aspect of Ancestor
more info
 
nuclear matrix IBA
Inferred from Biological aspect of Ancestor
more info
 
nuclear pore IBA
Inferred from Biological aspect of Ancestor
more info
 
colocalizes_with nuclear pore ISO
Inferred from Sequence Orthology
more info
 
nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
exportin-T
Names
exportin(tRNA)
tRNA exportin

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081056.1NP_001074525.1  exportin-T

    See identical proteins and their annotated locations for NP_001074525.1

    Status: PROVISIONAL

    Source sequence(s)
    AC124413, AC124992
    Related
    ENSMUSP00000043488, ENSMUST00000039810
    Conserved Domains (2) summary
    smart00913
    Location:2188
    IBN_N; Importin-beta N-terminal domain
    pfam08389
    Location:100247
    Xpo1; Exportin 1-like protein

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000076.6 Reference GRCm38.p3 C57BL/6J

    Range
    121587380..121626316 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006514204.2XP_006514267.1  

    See identical proteins and their annotated locations for XP_006514267.1

    Conserved Domains (2) summary
    smart00913
    Location:2188
    IBN_N; Importin-beta N-terminal domain
    pfam08389
    Location:100247
    Xpo1; Exportin 1-like protein
  2. XM_006514206.2XP_006514269.1  

    Conserved Domains (2) summary
    smart00913
    Location:2188
    IBN_N; Importin-beta N-terminal domain
    pfam08389
    Location:98245
    Xpo1; Exportin 1-like protein
  3. XM_006514207.2XP_006514270.1  

    Conserved Domains (2) summary
    smart00913
    Location:2188
    IBN_N; Importin-beta N-terminal domain
    pfam08389
    Location:100247
    Xpo1; Exportin 1-like protein
  4. XM_006514208.2XP_006514271.1  

    Conserved Domains (1) summary
    pfam08389
    Location:6137
    Xpo1; Exportin 1-like protein

Alternate Mm_Celera

Genomic

  1. AC_000032.1 Alternate Mm_Celera

    Range
    123975603..124005003 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011251967.1XP_011250269.1  

    Conserved Domains (2) summary
    smart00913
    Location:2188
    IBN_N; Importin-beta N-terminal domain
    pfam08389
    Location:100247
    Xpo1; Exportin 1-like protein

Alternate Mm_Celera

Genomic

  1. NW_001033797.1 Alternate Mm_Celera

    Range
    150..9119
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)