Format

Send to:

Choose Destination

A2cp1_0935 DNA ligase D [ Anaeromyxobacter dehalogenans 2CP-1 ]

Gene ID: 7298605, discontinued on 4-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:
Gene symbol
A2cp1_0935
Gene description
DNA ligase D
Locus tag
A2cp1_0935
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Anaeromyxobacter dehalogenans 2CP-1 (strain: 2CP-1, culture-collection: ATCC:BAA-258, other: type strain of Anaeromyxobacter dehalogenans)
Lineage
Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Anaeromyxobacter

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Non-homologous end-joining, organism-specific biosystem (from KEGG)
    Non-homologous end-joining, organism-specific biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
  • Non-homologous end-joining, conserved biosystem (from KEGG)
    Non-homologous end-joining, conserved biosystemNonhomologous end joining (NHEJ) eliminates DNA double-strand breaks (DSBs) by direct ligation. NHEJ involves binding of the KU heterodimer to double-stranded DNA ends, recruitment of DNA-PKcs (MRX c...
Names
DNA ligase D
YP_002491352.1
  • TIGRFAM: DNA ligase D, 3'-phosphoesterase domain protein; DNA polymerase LigD, polymerase domain protein
    PFAM: DNA primase small subunit; ATP dependent DNA ligase
    KEGG: ank:AnaeK_0932 DNA ligase D, 3'-phosphoesterase domain protein

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011891.1 Reference assembly

    Range
    1052813..1055182
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_002491352.1 DNA ligase D [Anaeromyxobacter dehalogenans 2CP-1]

    Status: PROVISIONAL