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    MAGED4 melanoma antigen family D, 4 [ Homo sapiens ]

    Gene ID: 728239, updated on 11-May-2012
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    Summary

    Official Symbol
    MAGED4provided by HGNC
    Official Full Name
    melanoma antigen family D, 4provided by HGNC
    Primary source
    HGNC:23793
    Locus tag
    hCG_32481
    See related
    Ensembl:ENSG00000154545; MIM:300702; Vega:OTTHUMG00000042235
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    MAGE1; MAGEE1; MAGE-E1; MAGED4B; MGC3210; FLJ39060; KIAA1859
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    Genomic context

    Location :
    Xp11.22
    Sequence :
    Chromosome: X; NC_000023.10 (51928008..51935364)
    See MAGED4 in Epigenomics, MapViewer

    Chromosome X - NC_000023.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC401589 Neighboring gene small nucleolar RNA, H/ACA box 11E Neighboring gene melanoma antigen family D, 4B Neighboring gene uncharacterized LOC100129860 Neighboring gene small nucleolar RNA, H/ACA box 11D Neighboring gene family with sequence similarity 156, member A pseudogene

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Large-scale analysis of the human ubiquitin-related proteome. Matsumoto M, et al. Proteomics, 2005 Nov. PMID 16196087.
    2. MAGE-E1, a new member of the melanoma-associated antigen gene family and its expression in human glioma. Sasaki M, et al. Cancer Res, 2001 Jun 15. PMID 11406556.
    3. The sequence of the human genome. Venter JC, et al. Science, 2001 Feb 16. PMID 11181995.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Phenotypes

    Review eQTL and phenotype association data in this region using PheGenI

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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:608671 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS 
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    General gene information

    Markers

    Genotypes

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    General protein information

    Preferred Names
    melanoma-associated antigen D4
    Names
    melanoma-associated antigen D4
    MAGE-D4 antigen
    MAGE-E1 antigen
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    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001098800.1 → NP_001092270.1  melanoma-associated antigen D4

      Status: VALIDATED

      Source sequence(s)
      AL928717
      Consensus CDS
      CCDS48116.1
      UniProtKB/Swiss-Prot
      Q96JG8
      Related
      ENSP00000364777, OTTHUMP00000039224, ENST00000375626, OTTHUMT00000100439
      Conserved Domains (2) summary
      PRK14951
      Location:138 – 274
      Blast Score: 111
      PRK14951; DNA polymerase III subunits gamma and tau; Provisional
      pfam01454
      Location:420 – 589
      Blast Score: 711
      MAGE; MAGE family

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000023.10 Reference GRCh37.p5 Primary Assembly

      Range
      51928008..51935364
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000155.1 Alternate HuRef

      Range
      49240290..49247646, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AL928717.5 CAI40426.1
    genomic CH471230.1 EAW62886.1
      EAW62887.1
      EAW62889.1
      EAW62890.1
      EAW62891.1
      EAW62892.1
      EAW62893.1
    mRNA AB040527.1 BAB33378.1
    mRNA AB040528.1 BAB33379.1
    mRNA AB040529.1 BAB33380.1
    mRNA AB058762.2 BAB47488.2
    mRNA AF320908.1 AAG38604.1
    mRNA AF329733.1 AAL50032.1
    mRNA AK094541.1 None
    mRNA AK098830.1 None
    mRNA AK289458.1 BAF82147.1
    mRNA AK308365.1 None
    mRNA AL136582.1 CAB66517.1
    mRNA BC001207.1 AAH01207.1
    mRNA BC063838.1 AAH63838.1
    mRNA BC081566.1 AAH81566.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q96JG8.3 GenPept UniProtKB/Swiss-Prot:Q96JG8
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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