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DSCAM DS cell adhesion molecule [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 722556, updated on 5-Mar-2024

Summary

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Official Symbol
DSCAMprovided by VGNC
Official Full Name
DS cell adhesion moleculeprovided by VGNC
Primary source
VGNC:VGNC:72000
See related
Ensembl:ENSMMUG00000005174
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
34
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 3 NC_041756.1 (5805428..6629451)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 3 NC_027895.1 (5837947..6694216)

Chromosome 3 - NC_041756.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114676701 Neighboring gene beta-secretase 2 Neighboring gene small nucleolar RNA SNORA51 Neighboring gene uncharacterized LOC114676801 Neighboring gene Purkinje cell protein 4 Neighboring gene immunoglobulin superfamily member 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell-cell adhesion mediator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dendrite self-avoidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Down syndrome cell adhesion molecule

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041756.1 Reference Mmul_10 Primary Assembly

    Range
    5805428..6629451
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028845317.1 → XP_028701150.1  Down syndrome cell adhesion molecule isoform X1

    UniProtKB/TrEMBL
    A0A5F8AP79
    Related
    ENSMMUP00000079186.1, ENSMMUT00000094744.1
    Conserved Domains (7) summary
    cd05734
    Location:707 → 784
    Ig_DSCAM; Immunoglobulin (Ig)-like domain of Down Syndrome Cell Adhesion molecule (DSCAM)
    smart00408
    Location:518 → 575
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:1380 → 1470
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:613 → 680
    Ig; Immunoglobulin domain
    pfam07679
    Location:235 → 310
    I-set; Immunoglobulin I-set domain
    pfam13927
    Location:1301 → 1363
    Ig_3; Immunoglobulin domain
    cl11960
    Location:802 → 889
    Ig; Immunoglobulin domain

  2. XM_028845318.1 → XP_028701151.1  Down syndrome cell adhesion molecule isoform X2

    UniProtKB/TrEMBL
    F7CZ98
    Related
    ENSMMUP00000006849.4, ENSMMUT00000007290.4
    Conserved Domains (7) summary
    cd05734
    Location:572 → 649
    Ig_DSCAM; Immunoglobulin (Ig)-like domain of Down Syndrome Cell Adhesion molecule (DSCAM)
    smart00408
    Location:383 → 440
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:1245 → 1335
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00096
    Location:478 → 545
    Ig; Immunoglobulin domain
    pfam07679
    Location:100 → 175
    I-set; Immunoglobulin I-set domain
    pfam13927
    Location:272 → 353
    Ig_3; Immunoglobulin domain
    cl11960
    Location:667 → 754
    Ig; Immunoglobulin domain
Nucleotide Protein
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