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    Dscc1 defective in sister chromatid cohesion 1 homolog (S. cerevisiae) [ Mus musculus (house mouse) ]

    Gene ID: 72107, updated on 26-Feb-2013
    Official Symbol
    Dscc1provided by MGI
    Official Full Name
    defective in sister chromatid cohesion 1 homolog (S. cerevisiae)provided by MGI
    Primary source
    MGI:1919357
    See related
    Ensembl:ENSMUSG00000022422; Vega:OTTMUSG00000023435
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Dcc1; 2010006I05Rik; 2600005O03Rik
    Location :
    15 D1; 15
    Sequence :
    Chromosome: 15; NC_000081.6 (55076101..55090478, complement)
    See Dscc1 in Epigenomics, MapViewer

    Chromosome 15 - NC_000081.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 21535 Neighboring gene TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor Neighboring gene predicted gene 9920 Neighboring gene DEP domain containing MTOR-interacting protein Neighboring gene collagen, type XIV, alpha 1 Neighboring gene RIKEN cDNA 1700040F17 gene

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. A conditional knockout resource for the genome-wide study of mouse gene function. Skarnes WC, et al. Nature, 2011 Jun 15. PMID 21677750.
    2. Genes expressed in Atoh1 neuronal lineages arising from the r1/isthmus rhombic lip. Machold R, et al. Gene Expr Patterns, 2011 Jun-Jul. PMID 21440680.
    3. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068.
    4. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073.
    5. The transcriptional landscape of the mammalian genome. Carninci P, et al. Science, 2005 Sep 2. PMID 16141072.

    See all (12) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (Floxed/Frt) (1) 

    Markers

    Genotypes

    Homology

    Clone Names

    • MGC151210, MGC151212

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		  
    cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		  
    maintenance of mitotic sister chromatid cohesion ISO
    Inferred from Sequence Orthology
    more info
    		  
    post-translational protein acetylation ISO
    Inferred from Sequence Orthology
    more info
    		  
    regulation of DNA replication ISO
    Inferred from Sequence Orthology
    more info
    		  
    Component Evidence Code Pubs
    chromatin ISO
    Inferred from Sequence Orthology
    more info
    		  
    chromosome, centromeric region ISO
    Inferred from Sequence Orthology
    more info
    		  
    nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
    		  
    nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    Preferred Names
    sister chromatid cohesion protein DCC1
    Names
    sister chromatid cohesion protein DCC1
    defective in sister chromatid cohesion protein 1 homolog

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_183089.2 → NP_898912.2  sister chromatid cohesion protein DCC1

      Status: VALIDATED

      Source sequence(s)
      AK008137, AK011162, BM940984
      Consensus CDS
      CCDS27473.1
      UniProtKB/Swiss-Prot
      Q14AI0
      UniProtKB/TrEMBL
      Q8C1P7
      Related
      ENSMUSP00000023059, OTTMUSP00000027432, ENSMUST00000023059, OTTMUST00000056961
      Conserved Domains (1) summary
      pfam09724
      Location:48 – 364
      Blast Score: 877
      DUF2036; Uncharacterized conserved protein (DUF2036)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 103

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p1 C57BL/6J

    Genomic

    1. NC_000081.6 Reference GRCm38.p1 C57BL/6J

      Range
      55076101..55090478, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Mm_Celera

    Genomic

    1. AC_000037.1 Alternate Mm_Celera

      Range
      56614624..56628975, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    genomic AAHY01122324.1 (34677..40485) None
    genomic AAHY01122325.1 None
    genomic AC137950.16 (19139..33516) None
    genomic CH466545.1 EDL29269.1 mixed
    mRNA AK008137.1 BAC25201.1 C57BL/6J
    mRNA AK011162.1 None C57BL/6J
    mRNA AK052329.1 None C57BL/6J
    mRNA AK144502.1 None C57BL/6
    mRNA BC099382.1 AAH99382.1
    mRNA BC116833.1 AAI16834.1
    mRNA BC116835.1 AAI16836.1
    mRNA BM940984.1 None C57BL/6J
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q14AI0.1 GenPept UniProtKB/Swiss-Prot:Q14AI0

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Chemical Information
    Molecular Biology Databases
    Research Materials
    Tools
    Miscellaneous

      Supplemental Content

      Table of contents

      Related information

      • Order cDNA clone
        Order cDNA clone
      • BioProjects
        BioProjects related to a gene
      • CCDS
        Links from Gene to CCDS are established if a gene encodes a protein sequence that is a member of a Consensus CDS (CCDS).
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • dbVar
        Link from Gene to dbVar
      • EST
        Link to related EST entry
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • GEO Profiles
        Related GEO
      • HomoloGene
        Links between HomoloGene and Gene are provided by the HomoloGene group when a gene is included in a HomoloGene record.
      • Map Viewer
        These links are maintained by the Map Viewer group and are provided when a GeneID is annotated on a map for the same species.
      • Nucleotide
        Link to related Nucleotide entry
      • Probe
        Related Probe entry
      • Protein
        Link to related protein entry
      • PubChem Compound
        PubChem Compounds
      • PubChem Substance
        PubChem Substances
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • RefSeq RNAs
        Link to Nucleotide RefSeq RNAs
      • SNP
        Related SNP records
      • SNP: GeneView
        SNPs linked from GeneView
      • Taxonomy
        Link to related taxonomy entry
      • UniGene
        Links are provided between Gene and UniGene when both databases calculate links to the same mRNA record (gi).
      • UniSTS
        Related UniSTS records

      Links to other resources

      General information

      Related sites

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