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Noxo1 NADPH oxidase organizer 1 [ Mus musculus (house mouse) ]

Gene ID: 71893, updated on 21-May-2016
Official Symbol
Noxo1provided by MGI
Official Full Name
NADPH oxidase organizer 1provided by MGI
Primary source
MGI:MGI:1919143
See related
Ensembl:ENSMUSG00000019320 Vega:OTTMUSG00000021039
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
hslt; Snx28; P41NOX; P41NOXA; P41NOXB; P41NOXC; 2310034C04Rik
Orthologs
Location:
17 A3.3; 17 12.49 cM
Exon count:
10
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 17 NC_000083.6 (24696234..24700530)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 17 NC_000083.5 (24833179..24837475)

Chromosome 17 - NC_000083.6Genomic Context describing neighboring genes Neighboring gene synaptogyrin 3 Neighboring gene growth factor, erv1 (S. cerevisiae)-like (augmenter of liver regeneration) Neighboring gene transducin (beta)-like 3 Neighboring gene ring finger protein 151

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Spontaneous (1) 
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enzyme binding ISO
Inferred from Sequence Orthology
more info
 
identical protein binding ISO
Inferred from Sequence Orthology
more info
 
lipid binding IEA
Inferred from Electronic Annotation
more info
 
phosphatidylinositol binding IBA
Inferred from Biological aspect of Ancestor
more info
 
phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 
superoxide-generating NADPH oxidase activator activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
extracellular matrix disassembly ISO
Inferred from Sequence Orthology
more info
 
oxidation-reduction process IBA
Inferred from Biological aspect of Ancestor
more info
 
superoxide metabolic process IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
NADPH oxidase complex IBA
Inferred from Biological aspect of Ancestor
more info
 
NADPH oxidase complex ISO
Inferred from Sequence Orthology
more info
 
intracellular IBA
Inferred from Biological aspect of Ancestor
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
NADPH oxidase organizer 1
Names
nox organizer 1
sorting nexin-28

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_027988.4NP_082264.2  NADPH oxidase organizer 1

    See identical proteins and their annotated locations for NP_082264.2

    Status: VALIDATED

    Source sequence(s)
    AC154566
    Consensus CDS
    CCDS50018.1
    UniProtKB/Swiss-Prot
    Q8VCM2
    Related
    ENSMUSP00000019464, OTTMUSP00000023108, ENSMUST00000019464, OTTMUST00000049755
    Conserved Domains (3) summary
    cd12024
    Location:235287
    SH3_NoxO1_2; Second or C-terminal Src homology 3 domain of NADPH oxidase (Nox) Organizing protein 1
    cl02563
    Location:3122
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
    cl17036
    Location:161216
    SH3; Src Homology 3 domain superfamily

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000083.6 Reference GRCm38.p3 C57BL/6J

    Range
    24696234..24700530
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006524949.2XP_006525012.1  

    See identical proteins and their annotated locations for XP_006525012.1

    UniProtKB/Swiss-Prot
    Q8VCM2
    Conserved Domains (3) summary
    cd12024
    Location:235287
    SH3_NoxO1_2; Second or C-terminal Src homology 3 domain of NADPH oxidase (Nox) Organizing protein 1
    cl02563
    Location:3122
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
    cl17036
    Location:161216
    SH3; Src Homology 3 domain superfamily
  2. XM_006524952.2XP_006525015.1  

    Conserved Domains (3) summary
    cd12024
    Location:189241
    SH3_NoxO1_2; Second or C-terminal Src homology 3 domain of NADPH oxidase (Nox) Organizing protein 1
    cl02563
    Location:380
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
    cl17036
    Location:115170
    SH3; Src Homology 3 domain superfamily
  3. XM_006524953.2XP_006525016.1  

    Conserved Domains (3) summary
    cd12024
    Location:188240
    SH3_NoxO1_2; Second or C-terminal Src homology 3 domain of NADPH oxidase (Nox) Organizing protein 1
    cl02563
    Location:379
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
    cl17036
    Location:114169
    SH3; Src Homology 3 domain superfamily
  4. XM_006524955.2XP_006525018.1  

    Conserved Domains (2) summary
    cl02563
    Location:3122
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
    cl17036
    Location:161216
    SH3; Src Homology 3 domain superfamily
  5. XM_011246629.1XP_011244931.1  

    See identical proteins and their annotated locations for XP_011244931.1

    UniProtKB/Swiss-Prot
    Q8VCM2
    Conserved Domains (3) summary
    cd12024
    Location:235287
    SH3_NoxO1_2; Second or C-terminal Src homology 3 domain of NADPH oxidase (Nox) Organizing protein 1
    cl02563
    Location:3122
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
    cl17036
    Location:161216
    SH3; Src Homology 3 domain superfamily
  6. XM_006524951.2XP_006525014.1  

    Conserved Domains (3) summary
    cd12024
    Location:234286
    SH3_NoxO1_2; Second or C-terminal Src homology 3 domain of NADPH oxidase (Nox) Organizing protein 1
    cl02563
    Location:3121
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
    cl17036
    Location:160215
    SH3; Src Homology 3 domain superfamily
  7. XM_006524950.2XP_006525013.1  

    See identical proteins and their annotated locations for XP_006525013.1

    UniProtKB/Swiss-Prot
    Q8VCM2
    Conserved Domains (3) summary
    cd12024
    Location:235287
    SH3_NoxO1_2; Second or C-terminal Src homology 3 domain of NADPH oxidase (Nox) Organizing protein 1
    cl02563
    Location:3122
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
    cl17036
    Location:161216
    SH3; Src Homology 3 domain superfamily
  8. XM_011246630.1XP_011244932.1  

    Conserved Domains (2) summary
    cd12024
    Location:107159
    SH3_NoxO1_2; Second or C-terminal Src homology 3 domain of NADPH oxidase (Nox) Organizing protein 1
    cl17036
    Location:3388
    SH3; Src Homology 3 domain superfamily

Alternate Mm_Celera

Genomic

  1. AC_000039.1 Alternate Mm_Celera

    Range
    25219149..25223451
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)