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    PLES_48841 ABC transporter permease [ Pseudomonas aeruginosa LESB58 ]

    Gene ID: 7178796, updated on 20-Apr-2013
    Gene symbol
    PLES_48841
    Gene description
    ABC transporter permease
    Locus tag
    PLES_48841
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa LESB58 (strain: LESB58)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
    Sequence :
    NC_011770.1 (5376788..5377699)

    NC_011770.1Genomic Context describing neighboring genes Neighboring gene putative binding protein component of ABC transporter Neighboring gene ABC transporter permease Neighboring gene putative ATP-binding component of ABC transporter Neighboring gene dipeptide transporter ATP-binding subunit

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Newly introduced genomic prophage islands are critical determinants of in vivo competitiveness in the Liverpool Epidemic Strain of Pseudomonas aeruginosa. Winstanley C, et al. Genome Res, 2009 Jan. PMID 19047519.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    • ABC transporters, organism-specific biosystem (from KEGG)
      ABC transporters, organism-specific biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
    • ABC transporters, conserved biosystem (from KEGG)
      ABC transporters, conserved biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
    • Dipeptide transport system, organism-specific biosystem (from KEGG)
      Dipeptide transport system, organism-specific biosystemStructural complex; Environmental information processing; Peptide and nickel transport system
    Names
    ABC transporter permease

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_011770.1

      Range
      5376788..5377699
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_002442465.1 ABC transporter permease [Pseudomonas aeruginosa LESB58]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B7V044
      Conserved Domains (3) summary
      cd06261
      Location:160 – 281
      Blast Score: 138
      TM_PBP2; Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and ...
      PRK10913
      Location:18 – 300
      Blast Score: 833
      PRK10913; dipeptide transporter; Provisional
      pfam12911
      Location:18 – 71
      Blast Score: 140
      OppC_N; N-terminal TM domain of oligopeptide transport permease C
    Nucleotide Protein
    Heading Accession and Version
    genomic FM209186.1 CAW29638.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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