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TTC17 tetratricopeptide repeat domain 17 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 716254, updated on 5-Mar-2024

Summary

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Official Symbol
TTC17provided by VGNC
Official Full Name
tetratricopeptide repeat domain 17provided by VGNC
Primary source
VGNC:VGNC:79516
Locus tag
EGK_06337
See related
Ensembl:ENSMMUG00000000844
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
26
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (22233663..22372911, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (22581855..22729643, complement)

Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-670 Neighboring gene C-terminal-binding protein 2 pseudogene Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene uncharacterized LOC106993251 Neighboring gene apoptosis inhibitor 5 Neighboring gene heterogeneous nuclear ribonucleoprotein K pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cilium organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetratricopeptide repeat protein 17
Names
Tetratricopeptide repeat protein 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041767.1 Reference Mmul_10 Primary Assembly

    Range
    22233663..22372911 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015114424.2 → XP_014969910.1  tetratricopeptide repeat protein 17 isoform X1

    UniProtKB/TrEMBL
    A0A1D5RB79, A0A1D5RBT9
    Related
    ENSMMUP00000057780.1, ENSMMUT00000079057.2
    Conserved Domains (6) summary
    smart00028
    Location:689 → 718
    TPR; Tetratricopeptide repeats
    sd00006
    Location:621 → 647
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:1145 → 1175
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:1111 → 1173
    TPR_11; TPR repeat
    cd16269
    Location:379 → 390
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:329 → 410
    GBP_C; Guanylate-binding protein, C-terminal domain

  2. XM_015114425.2 → XP_014969911.1  tetratricopeptide repeat protein 17 isoform X2

    UniProtKB/TrEMBL
    A0A1D5RB79, A0A663DG63, A0A8J8Y4I9, F6TGG5, G7NDJ6
    Related
    ENSMMUP00000001140.3, ENSMMUT00000001214.4
    Conserved Domains (6) summary
    smart00028
    Location:689 → 718
    TPR; Tetratricopeptide repeats
    sd00006
    Location:621 → 647
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:1088 → 1118
    TPR_1; Tetratricopeptide repeat
    pfam13414
    Location:1054 → 1116
    TPR_11; TPR repeat
    cd16269
    Location:379 → 390
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:329 → 410
    GBP_C; Guanylate-binding protein, C-terminal domain

  3. XM_015114426.2 → XP_014969912.1  tetratricopeptide repeat protein 17 isoform X3

    UniProtKB/TrEMBL
    F6TGF9
    Related
    ENSMMUP00000001141.3, ENSMMUT00000001215.4
    Conserved Domains (5) summary
    smart00028
    Location:689 → 718
    TPR; Tetratricopeptide repeats
    sd00006
    Location:621 → 647
    TPR; TPR repeat [structural motif]
    pfam13414
    Location:658 → 718
    TPR_11; TPR repeat
    cd16269
    Location:379 → 390
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:329 → 410
    GBP_C; Guanylate-binding protein, C-terminal domain
Nucleotide Protein
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