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    trpA tryptophan synthase subunit alpha [ Escherichia coli UMN026 ]

    Gene ID: 7158574, updated on 18-May-2013
    Gene symbol
    trpA
    Gene description
    tryptophan synthase subunit alpha
    Locus tag
    ECUMN_1559
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli UMN026 (strain: UMN026)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
    Sequence :
    NC_011751.1 (1568249..1569055, complement)

    NC_011751.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene tryptophan synthase subunit beta Neighboring gene bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase Neighboring gene bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase Neighboring gene anthranilate synthase component I

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths. Touchon M, et al. PLoS Genet, 2009 Jan. PMID 19165319.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    tryptophan synthase subunit alpha
    YP_002412302.1
    • catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_011751.1

      Range
      1568249..1569055, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_002412302.1 tryptophan synthase subunit alpha [Escherichia coli UMN026]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      B7N473
      Conserved Domains (2) summary
      CHL00200
      Location:1 – 268
      Blast Score: 387
      trpA; tryptophan synthase alpha subunit; Provisional
      cd04724
      Location:18 – 263
      Blast Score: 719
      Tryptophan_synthase_alpha; Ttryptophan synthase (TRPS) alpha subunit (TSA). TPRS is a bifunctional tetrameric enzyme (2 alpha and 2 beta subunits) that catalyzes the last two steps of L-tryptophan biosynthesis. Alpha and beta subunit catalyze two distinct reactions which are both ...
    Nucleotide Protein
    Heading Accession and Version
    genomic CU928163.2 CAR12766.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    B7N473.1 GenPept

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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