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ABLIM3 actin binding LIM protein family member 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 709180, updated on 5-Mar-2024

Summary

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Official Symbol
ABLIM3provided by VGNC
Official Full Name
actin binding LIM protein family member 3provided by VGNC
Primary source
VGNC:VGNC:69546
See related
Ensembl:ENSMMUG00000021657
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
25
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (146655599..146774644)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (147265532..147384662)

Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene SH3 domain and tetratricopeptide repeats 2 Neighboring gene U6 spliceosomal RNA Neighboring gene microRNA mir-584 Neighboring gene actin filament associated protein 1 like 1 Neighboring gene GrpE like 2, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Form deprivation modulates retinal neurogenesis in primate experimental myopia. Tkatchenko AV, et al. Proc Natl Acad Sci U S A, 2006 Mar 21. PMID 16537371, Free PMC Article
  2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lamellipodium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in stress fiber IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
actin-binding LIM protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041759.1 Reference Mmul_10 Primary Assembly

    Range
    146655599..146774644
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028849830.1 → XP_028705663.1  actin-binding LIM protein 3 isoform X1

    UniProtKB/TrEMBL
    F7F953, H9EPC9
    Related
    ENSMMUP00000046606.1, ENSMMUT00000060003.2
    Conserved Domains (6) summary
    smart00153
    Location:648 → 683
    VHP; Villin headpiece domain
    cd09327
    Location:23 → 74
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:79 → 134
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:151 → 202
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:210 → 265
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam16182
    Location:274 → 647
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

  2. XM_015141213.2 → XP_014996699.1  actin-binding LIM protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A1D5Q7V5
    Related
    ENSMMUP00000044121.2, ENSMMUT00000065137.2
    Conserved Domains (6) summary
    smart00153
    Location:615 → 650
    VHP; Villin headpiece domain
    cd09327
    Location:23 → 74
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:79 → 134
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:151 → 202
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:210 → 265
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam16182
    Location:274 → 614
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

  3. XM_015141214.2 → XP_014996700.1  actin-binding LIM protein 3 isoform X4

    UniProtKB/TrEMBL
    F7F943
    Related
    ENSMMUP00000028521.4, ENSMMUT00000030479.4
    Conserved Domains (6) summary
    smart00153
    Location:599 → 634
    VHP; Villin headpiece domain
    cd09327
    Location:23 → 74
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:79 → 134
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:151 → 202
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:210 → 265
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam16182
    Location:274 → 598
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

  4. XM_015141216.2 → XP_014996702.1  actin-binding LIM protein 3 isoform X6

    UniProtKB/TrEMBL
    F6YHN6
    Conserved Domains (6) summary
    smart00153
    Location:553 → 588
    VHP; Villin headpiece domain
    cd09327
    Location:23 → 74
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:79 → 134
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:151 → 202
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:210 → 265
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam16182
    Location:274 → 552
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

  5. XM_028849831.1 → XP_028705664.1  actin-binding LIM protein 3 isoform X7

    UniProtKB/TrEMBL
    F6YHN6
    Conserved Domains (6) summary
    smart00153
    Location:537 → 572
    VHP; Villin headpiece domain
    cd09327
    Location:23 → 74
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:79 → 134
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:151 → 202
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:210 → 265
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam16182
    Location:274 → 536
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

  6. XM_015141212.2 → XP_014996698.1  actin-binding LIM protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A1D5R7R4
    Related
    ENSMMUP00000056354.2, ENSMMUT00000072217.2
    Conserved Domains (6) summary
    smart00153
    Location:638 → 673
    VHP; Villin headpiece domain
    cd09327
    Location:23 → 74
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:79 → 134
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:151 → 202
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:210 → 265
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam16182
    Location:274 → 637
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

  7. XM_015141215.2 → XP_014996701.1  actin-binding LIM protein 3 isoform X5

    UniProtKB/TrEMBL
    F6YHN6
    Related
    ENSMMUP00000029646.4, ENSMMUT00000031688.4
    Conserved Domains (6) summary
    smart00153
    Location:586 → 621
    VHP; Villin headpiece domain
    cd09327
    Location:23 → 74
    LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
    cd09328
    Location:79 → 134
    LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
    cd09329
    Location:151 → 202
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:210 → 265
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam16182
    Location:274 → 585
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

  8. XM_015141218.2 → XP_014996704.1  actin-binding LIM protein 3 isoform X8

    Conserved Domains (5) summary
    smart00153
    Location:551 → 586
    VHP; Villin headpiece domain
    cd09329
    Location:165 → 216
    LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
    cd09330
    Location:224 → 279
    LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
    pfam16182
    Location:288 → 550
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
    cl02475
    Location:127 → 148
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
Nucleotide Protein
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