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CRTAC1 cartilage acidic protein 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 707486, updated on 5-Mar-2024

Summary

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Official Symbol
CRTAC1provided by VGNC
Official Full Name
cartilage acidic protein 1provided by VGNC
Primary source
VGNC:VGNC:71408
See related
Ensembl:ENSMMUG00000018154
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
16
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (98315033..98480229, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (93388521..93553382, complement)

Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene zinc finger FYVE-type containing 27 Neighboring gene secreted frizzled related protein 5 Neighboring gene golgin A7 family member B Neighboring gene R3H domain and coiled-coil containing 1 like Neighboring gene lysyl oxidase like 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axonal fasciculation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cartilage acidic protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041762.1 Reference Mmul_10 Primary Assembly

    Range
    98315033..98480229 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015147883.2 → XP_015003369.2  cartilage acidic protein 1 isoform X1

    UniProtKB/TrEMBL
    F7EGA6, F7F2I8, F7F2K5
    Related
    ENSMMUP00000023875.4, ENSMMUT00000025518.4
    Conserved Domains (3) summary
    pfam07645
    Location:557 → 603
    EGF_CA; Calcium-binding EGF domain
    pfam07593
    Location:458 → 516
    UnbV_ASPIC; ASPIC and UnbV
    pfam13517
    Location:297 → 361
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella

  2. XM_015147885.2 → XP_015003371.2  cartilage acidic protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A1D5R323, F7F2I8
    Related
    ENSMMUP00000054708.2, ENSMMUT00000073460.2
    Conserved Domains (3) summary
    pfam07645
    Location:557 → 603
    EGF_CA; Calcium-binding EGF domain
    pfam07593
    Location:458 → 516
    UnbV_ASPIC; ASPIC and UnbV
    pfam13517
    Location:297 → 361
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
Nucleotide Protein
Heading Accession and Version

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