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SMC4 structural maintenance of chromosomes 4 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 702615, updated on 5-Mar-2024

Summary

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Official Symbol
SMC4provided by VGNC
Official Full Name
structural maintenance of chromosomes 4provided by VGNC
Primary source
VGNC:VGNC:77699
See related
Ensembl:ENSMMUG00000017291
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Also known as
SMC4L1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
24
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (62673330..62709908)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (134276995..134313905, complement)

Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene chromosome 2 C3orf80 homolog Neighboring gene intraflagellar transport 80 Neighboring gene 60S ribosomal protein L35a pseudogene Neighboring gene microRNA mir-16-2 Neighboring gene microRNA mir-15b Neighboring gene signal peptidase complex subunit 2-like Neighboring gene tripartite motif containing 59 Neighboring gene U7 small nuclear RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitotic chromosome condensation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
structural maintenance of chromosomes protein 4
Names
SMC4 structural maintenance of chromosomes 4-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001261676.1 → NP_001248605.1  structural maintenance of chromosomes protein 4

    See identical proteins and their annotated locations for NP_001248605.1

    Status: PROVISIONAL

    Source sequence(s)
    JV045828
    UniProtKB/TrEMBL
    F7HUA3, G7MJE2, I0FN73
    Related
    ENSMMUP00000022753.4, ENSMMUT00000024310.4
    Conserved Domains (2) summary
    PHA03247
    Location:2 → 58
    PHA03247; large tegument protein UL36; Provisional
    pfam02463
    Location:82 → 1273
    SMC_N; RecF/RecN/SMC N terminal domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041755.1 Reference Mmul_10 Primary Assembly

    Range
    62673330..62709908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015131709.2 → XP_014987195.1  structural maintenance of chromosomes protein 4 isoform X2

    UniProtKB/TrEMBL
    G7MJE2
    Conserved Domains (3) summary
    cd03274
    Location:10 → 169
    ABC_SMC4_euk; ATP-binding cassette domain of eukaryotic SMC4 proteins
    smart00968
    Location:541 → 655
    SMC_hinge; SMC proteins Flexible Hinge Domain
    pfam02463
    Location:11 → 1202
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_028843195.1 → XP_028699028.1  structural maintenance of chromosomes protein 4 isoform X1

    UniProtKB/TrEMBL
    F7HUA3, G7MJE2, I0FN73
    Conserved Domains (2) summary
    PHA03247
    Location:2 → 58
    PHA03247; large tegument protein UL36; Provisional
    pfam02463
    Location:82 → 1273
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_015131710.2 → XP_014987196.1  structural maintenance of chromosomes protein 4 isoform X3

    UniProtKB/TrEMBL
    G7MJE2
    Conserved Domains (3) summary
    cd03274
    Location:945 → 1039
    ABC_SMC4_euk; ATP-binding cassette domain of eukaryotic SMC4 proteins
    smart00968
    Location:377 → 491
    SMC_hinge; SMC proteins Flexible Hinge Domain
    pfam02463
    Location:1 → 1038
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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