Display Settings:

Format

Send to:

Choose Destination
We are sorry, but NCBI web applications do not support your browser and may not function properly. More information

    TECTA tectorin alpha [ Homo sapiens (human) ]

    Gene ID: 7007, updated on 6-Jun-2013
    Official Symbol
    TECTAprovided by HGNC
    Official Full Name
    tectorin alphaprovided by HGNC
    Primary source
    HGNC:11720
    See related
    Ensembl:ENSG00000109927; HPRD:03985; MIM:602574; Vega:OTTHUMG00000149908
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    DFNA8; DFNA12; DFNB21
    Summary
    The tectorial membrane is an extracellular matrix of the inner ear that contacts the stereocilia bundles of specialized sensory hair cells. Sound induces movement of these hair cells relative to the tectorial membrane, deflects the stereocilia, and leads to fluctuations in hair-cell membrane potential, transducing sound into electrical signals. Alpha-tectorin is one of the major noncollagenous components of the tectorial membrane. Mutations in the TECTA gene have been shown to be responsible for autosomal dominant nonsyndromic hearing impairment and a recessive form of sensorineural pre-lingual non-syndromic deafness. [provided by RefSeq, Jul 2008]
    Location :
    11q22-q24
    Sequence :
    Chromosome: 11; NC_000011.9 (120973375..121061515)
    See TECTA in Epigenomics, MapViewer

    Chromosome 11 - NC_000011.9Genomic Context describing neighboring genes Neighboring gene glutamate receptor, ionotropic, kainate 4 Neighboring gene high mobility group box 1 pseudogene 42 Neighboring gene tubulin folding cofactor E-like Neighboring gene ribosomal protein S4X pseudogene 12 Neighboring gene sterol-C5-desaturase

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Deafness, autosomal dominant 12

    Summary from GeneReviews: Deafness and Hereditary Hearing Loss Overview Go to GeneReviews

    Disease Characteristics
    Hereditary hearing loss and deafness may be conductive, sensorineural, or a combination of both; syndromic (associated with malformations of the external ear or other organs or with medical problems involving other organ systems) or nonsyndromic (no associated visible abnormalities of the external ear or any related medical problems); and prelingual (before language develops) or postlingual (after language develops).
    Diagnosis Testing
    Genetic forms of hearing loss must be distinguished from acquired (non-genetic) causes of hearing loss. The genetic forms of hearing loss are diagnosed by otologic, audiologic, and physical examination, family history, ancillary testing (e.g., CT examination of the temporal bone), and molecular genetic testing. Molecular genetic testing, possible for many types of syndromic and nonsyndromic deafness, plays a prominent role in diagnosis and genetic counseling.
    Genetic Counseling
    Hereditary hearing loss can be inherited in an autosomal dominant, autosomal recessive, or X-linked recessive manner, as well as by mitochondrial inheritance. Genetic counseling and risk assessment depend on accurate determination of the specific genetic diagnosis. In the absence of a specific diagnosis, empiric recurrence risk figures, coupled with GJB2 and GJB6 molecular genetic testing results, can be used for genetic counseling.
    References

    Deafness, autosomal recessive 21

    Summary from GeneReviews: Deafness and Hereditary Hearing Loss Overview Go to GeneReviews

    Disease Characteristics
    Hereditary hearing loss and deafness may be conductive, sensorineural, or a combination of both; syndromic (associated with malformations of the external ear or other organs or with medical problems involving other organ systems) or nonsyndromic (no associated visible abnormalities of the external ear or any related medical problems); and prelingual (before language develops) or postlingual (after language develops).
    Diagnosis Testing
    Genetic forms of hearing loss must be distinguished from acquired (non-genetic) causes of hearing loss. The genetic forms of hearing loss are diagnosed by otologic, audiologic, and physical examination, family history, ancillary testing (e.g., CT examination of the temporal bone), and molecular genetic testing. Molecular genetic testing, possible for many types of syndromic and nonsyndromic deafness, plays a prominent role in diagnosis and genetic counseling.
    Genetic Counseling
    Hereditary hearing loss can be inherited in an autosomal dominant, autosomal recessive, or X-linked recessive manner, as well as by mitochondrial inheritance. Genetic counseling and risk assessment depend on accurate determination of the specific genetic diagnosis. In the absence of a specific diagnosis, empiric recurrence risk figures, coupled with GJB2 and GJB6 molecular genetic testing results, can be used for genetic counseling.
    References

    Markers

    Homology

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    cell-matrix adhesion IEA
    Inferred from Electronic Annotation
    more info
     
    sensory perception of sound IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    anchored to membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    proteinaceous extracellular matrix IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    alpha-tectorin
    Names
    alpha-tectorin

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_011633.1 RefSeqGene

      Range
      5001..93141
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_005422.2NP_005413.2  alpha-tectorin precursor

      Status: REVIEWED

      Source sequence(s)
      AP000646, AP000826
      Consensus CDS
      CCDS8434.1
      UniProtKB/Swiss-Prot
      O75443
      Related
      ENSP00000264037, ENST00000264037
      Conserved Domains (8) summary
      smart00539
      Location:98254
      Blast Score: 547
      NIDO; Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins.
      smart00216
      Location:14771638
      Blast Score: 321
      VWD; von Willebrand factor (vWF) type D domain
      smart00241
      Location:18052057
      Blast Score: 513
      ZP; Zona pellucida (ZP) domain
      smart00832
      Location:517591
      Blast Score: 245
      C8; This domain contains 8 conserved cysteine residues.
      cl02515
      Location:14271480
      Blast Score: 111
      VWC; von Willebrand factor type C domain
      pfam00094
      Location:322478
      Blast Score: 390
      VWD; von Willebrand factor type D domain
      pfam01826
      Location:597650
      Blast Score: 165
      TIL; Trypsin Inhibitor like cysteine rich domain
      pfam08742
      Location:12941368
      Blast Score: 220
      C8; C8 domain

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000011.9 Reference GRCh37.p10 Primary Assembly

      Range
      120973375..121061515
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000143.1 Alternate HuRef

      Range
      116913441..117001973
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018922.1 Alternate CHM1_1.0

      Range
      120839939..120928038
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

      Supplemental Content

      Recent activity

      Your browsing activity is empty.

      Activity recording is turned off.

      Turn recording back on

      See more...