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    Rleg2_5016 cbb3-type cytochrome c oxidase subunit II [ Rhizobium leguminosarum bv. trifolii WSM2304 ]

    Gene ID: 6978110, updated on 18-May-2013
    Gene symbol
    Rleg2_5016
    Gene description
    cbb3-type cytochrome c oxidase subunit II
    Locus tag
    Rleg2_5016
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rhizobium leguminosarum bv. trifolii WSM2304 (strain: WSM2304, biovar: trifolii)
    Lineage
    Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium
    Location :
    plasmid: pRLG201
    Sequence :
    NC_011368.1 (663716..664450)

    NC_011368.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene cbb3-type cytochrome c oxidase subunit I Neighboring gene Cbb3-type cytochrome oxidase component Neighboring gene cytochrome c oxidase, cbb3-type subunit III

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Complete genome sequence of Rhizobium leguminosarum bv trifolii strain WSM2304, an effective microsymbiont of the South American clover Trifolium polymorphum. Reeve W, et al. Stand Genomic Sci, 2010 Feb 28. PMID 21304679.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    cbb3-type cytochrome c oxidase subunit II
    YP_002278979.1
    • CcoO; FixO

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_011368.1

      Range
      663716..664450
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_002278979.1 cbb3-type cytochrome c oxidase subunit II [Rhizobium leguminosarum bv. trifolii WSM2304]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B6A0V5
      Conserved Domains (2) summary
      pfam02433
      Location:8 – 233
      Blast Score: 1129
      FixO; Cytochrome C oxidase, mono-heme subunit/FixO
      COG2993
      Location:7 – 240
      Blast Score: 981
      CcoO; Cbb3-type cytochrome oxidase, cytochrome c subunit [Energy production and conversion]
    Nucleotide Protein
    Heading Accession and Version
    genomic CP001192.1 ACI58239.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    ZP_02857090.1 GenPept

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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