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Dpse\GA22670 [ Drosophila pseudoobscura pseudoobscura ]

Gene ID: 6902153, updated on 12-Apr-2014
Official Symbol
Dpse\GA22670
Primary source
FLYBASE:FBgn0244073
Locus tag
Dpse_GA22670
Gene type
protein coding
RNA name
GA22670
RefSeq status
PROVISIONAL
Organism
Drosophila pseudoobscura pseudoobscura (strain: MV2-25, sub-species: pseudoobscura)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
dpse_GLEANR_10837; GA22670
Location:
chromosome: XL, map: unlocalized
Exon count :
6

NW_001589961.2Genomic Context describing neighboring genes Neighboring gene GA22671 gene product from transcript GA22671-RA Neighboring gene GA15173 gene product from transcript GA15173-RA Neighboring gene GA13932 gene product from transcript GA13932-RA Neighboring gene GA10439 gene product from transcript GA10439-RA

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • 2-Oxocarboxylic acid metabolism, organism-specific biosystem (from KEGG)
    2-Oxocarboxylic acid metabolism, organism-specific biosystem2-Oxocarboxylic acids, also called 2-oxo acids and alpha-keto acids, are the most elementary set of metabolites that includes pyruvate (2-oxopropanoate), 2-oxobutanoate, oxaloacetate (2-oxosuccinate)...
  • 2-Oxocarboxylic acid metabolism, conserved biosystem (from KEGG)
    2-Oxocarboxylic acid metabolism, conserved biosystem2-Oxocarboxylic acids, also called 2-oxo acids and alpha-keto acids, are the most elementary set of metabolites that includes pyruvate (2-oxopropanoate), 2-oxobutanoate, oxaloacetate (2-oxosuccinate)...
  • Alanine, aspartate and glutamate metabolism, organism-specific biosystem (from KEGG)
    Alanine, aspartate and glutamate metabolism, organism-specific biosystem
    Alanine, aspartate and glutamate metabolism
  • Alanine, aspartate and glutamate metabolism, conserved biosystem (from KEGG)
    Alanine, aspartate and glutamate metabolism, conserved biosystem
    Alanine, aspartate and glutamate metabolism
  • Biosynthesis of amino acids, organism-specific biosystem (from KEGG)
    Biosynthesis of amino acids, organism-specific biosystemThis map presents a modular architecture of the biosynthesis pathways of twenty amino acids, which may be viewed as consisting of the core part and its extensions. The core part is the KEGG module fo...
  • Biosynthesis of amino acids, conserved biosystem (from KEGG)
    Biosynthesis of amino acids, conserved biosystemThis map presents a modular architecture of the biosynthesis pathways of twenty amino acids, which may be viewed as consisting of the core part and its extensions. The core part is the KEGG module fo...
  • Carbon metabolism, organism-specific biosystem (from KEGG)
    Carbon metabolism, organism-specific biosystemCarbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excludi...
  • Carbon metabolism, conserved biosystem (from KEGG)
    Carbon metabolism, conserved biosystemCarbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excludi...
Preferred Names
GA22670 gene product from transcript GA22670-RA
Names
Dpse\GA22670-PA
GA22670
GA22670-PA

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001589961.2 

    Range
    5986078..5991242
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002133648.1XP_002133684.1  GA22670 [Drosophila pseudoobscura pseudoobscura]

    See proteins identical to XP_002133684.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B5DLB2
    Conserved Domains (2) summary
    cd00609
    Location:179565
    Blast Score: 483
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PTZ00377
    Location:98576
    Blast Score: 1746
    PTZ00377; alanine aminotransferase; Provisional

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