U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

H2ac12 H2A clustered histone 12 [ Rattus norvegicus (Norway rat) ]

Gene ID: 680322, updated on 13-Apr-2024

Summary

Go to the top of the page Help
Symbol
H2ac12provided by RGD
Full Name
H2A clustered histone 12provided by RGD
Primary source
RGD:1593006
See related
Ensembl:ENSRNOG00000066420 AllianceGenome:RGD:1593006
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable protein heterodimerization activity. Predicted to be located in nucleus. Predicted to be part of nucleosome. Orthologous to human H2AC12 (H2A clustered histone 12). [provided by Alliance of Genome Resources, Apr 2022]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
17p11
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 17 NC_086035.1 (47182193..47182658)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 17 NC_051352.1 (42486415..42486880)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (44527990..44528557)

Chromosome 17 - NC_086035.1Genomic Context describing neighboring genes Neighboring gene histone cluster 1 H4 family member B Neighboring gene H2B clustered histone 12 Neighboring gene transfer RNA threonine (anticodon AGU) 6 Neighboring gene transfer RNA isoleucine (anticodon AAU) 9

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
H2A clustered histone 12
Names
histone H2A type 1-H

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001408726.1 → NP_001395655.1  H2A clustered histone 12

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000017
    UniProtKB/TrEMBL
    A6KNB5, M0RDM4
    Related
    ENSRNOP00000086720.1, ENSRNOT00000112865.1

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086035.1 Reference GRCr8

    Range
    47182193..47182658
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools