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Rpl4 ribosomal protein L4 [ Mus musculus (house mouse) ]

Gene ID: 67891, updated on 28-May-2016
Official Symbol
Rpl4provided by MGI
Official Full Name
ribosomal protein L4provided by MGI
Primary source
MGI:MGI:1915141
See related
Ensembl:ENSMUSG00000032399
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2010004J23Rik
Orthologs
Location:
9; 9 D
Exon count:
10
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 9 NC_000075.6 (64173387..64178562)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (64021194..64026369)

Chromosome 9 - NC_000075.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 39360 Neighboring gene lactase-like Neighboring gene zwilch kinetochore protein Neighboring gene small nucleolar RNA, C/D box 16A Neighboring gene small nuclear RNA activating complex, polypeptide 5 Neighboring gene mitogen-activated protein kinase kinase 1 Neighboring gene ubiquitin carboxyl-terminal esterase L4

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
5S rRNA binding ISO
Inferred from Sequence Orthology
more info
 
poly(A) RNA binding ISO
Inferred from Sequence Orthology
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
positive regulation of axon extension ISO
Inferred from Sequence Orthology
more info
 
positive regulation of axonogenesis ISO
Inferred from Sequence Orthology
more info
 
translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
A band ISO
Inferred from Sequence Orthology
more info
 
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
cytosolic large ribosomal subunit ISO
Inferred from Sequence Orthology
more info
 
extracellular exosome ISO
Inferred from Sequence Orthology
more info
 
focal adhesion ISO
Inferred from Sequence Orthology
more info
 
intracellular ribonucleoprotein complex ISO
Inferred from Sequence Orthology
more info
PubMed 
large ribosomal subunit ISO
Inferred from Sequence Orthology
more info
 
membrane ISO
Inferred from Sequence Orthology
more info
 
nucleolus ISO
Inferred from Sequence Orthology
more info
 
nucleus ISO
Inferred from Sequence Orthology
more info
 
ribosome IEA
Inferred from Electronic Annotation
more info
 

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_024212.4NP_077174.1  60S ribosomal protein L4

    See identical proteins and their annotated locations for NP_077174.1

    Status: PROVISIONAL

    Source sequence(s)
    BC132323
    Consensus CDS
    CCDS40667.1
    UniProtKB/Swiss-Prot
    Q9D8E6
    UniProtKB/TrEMBL
    Q564E8
    Related
    ENSMUSP00000034966, ENSMUST00000034966
    Conserved Domains (3) summary
    PTZ00428
    Location:2352
    PTZ00428; 60S ribosomal protein L4; Provisional
    pfam14374
    Location:275352
    Ribos_L4_asso_C; 60S ribosomal protein L4 C-terminal domain
    cl00325
    Location:10265
    Ribosomal_L4; Ribosomal protein L4/L1 family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000075.6 Reference GRCm38.p3 C57BL/6J

    Range
    64173387..64178562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000031.1 Alternate Mm_Celera

    Range
    61398680..61403855
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)