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    Dsim\GD10608 [ Drosophila simulans ]

    Gene ID: 6733608, updated on 11-Aug-2012
    Official Symbol
    Dsim\GD10608
    Primary source
    FLYBASE:FBgn0182376
    Locus tag
    Dsim_GD10608
    Gene type
    protein coding
    RNA name
    GD10608
    RefSeq status
    PROVISIONAL
    Organism
    Drosophila simulans (strain: mixed)
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    dsim_GLEANR_10590; GD10608
    Location :
    chromosome: 2R
    Sequence :
    Chromosome: 2R; NT_167067.1 (3454355..3459423)

    Chromosome 2R - NT_167067.1Genomic Context describing neighboring genes Neighboring gene GD10134 gene product from transcript GD10134-RA Neighboring gene GD10607 gene product from transcript GD10607-RA Neighboring gene GD10133 gene product from transcript GD10133-RA Neighboring gene GD10132 gene product from transcript GD10132-RA

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction

    Homology

    Preferred Names
    GD10608 gene product from transcript GD10608-RA
    Names
    Dsim\GD10608-PA
    GD10608
    GD10608-PA

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_167067.1

      Range
      3454355..3459423
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002080626.1 → XP_002080662.1  GD10608 [Drosophila simulans]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B4QG97
      Conserved Domains (3) summary
      COG2319
      Location:53 – 334
      Blast Score: 189
      COG2319; FOG: WD40 repeat [General function prediction only]
      cl02567
      Location:80 – 329
      Blast Score: 238
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      cl14807
      Location:550 – 670
      Blast Score: 124
      ACE1-Sec16-like; Ancestral coatomer element 1 (ACE1) of COPII coat complex assembly protein Sec16
    Nucleotide Protein
    Heading Accession and Version
    genomic CM000362.1 EDX06247.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • RefSeq RNAs
        Link to Nucleotide RefSeq RNAs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

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