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Chchd3 coiled-coil-helix-coiled-coil-helix domain containing 3 [ Mus musculus (house mouse) ]

Gene ID: 66075, updated on 28-May-2016
Official Symbol
Chchd3provided by MGI
Official Full Name
coiled-coil-helix-coiled-coil-helix domain containing 3provided by MGI
Primary source
MGI:MGI:1913325
See related
Ensembl:ENSMUSG00000053768 Vega:OTTMUSG00000014758
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AW558177; 0610041L09Rik; 1700039J09Rik
Orthologs
Location:
6; 6 B1
Exon count:
10
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 6 NC_000072.6 (32792217..33060276, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (32742227..33010152, complement)

Chromosome 6 - NC_000072.6Genomic Context describing neighboring genes Neighboring gene plexin A4 Neighboring gene plexin A4, opposite strand 1 Neighboring gene predicted gene, 32007 Neighboring gene predicted gene, 40360 Neighboring gene zinc finger protein 212 pseudogene Neighboring gene exocyst complex component 4 Neighboring gene heat shock protein 8 pseudogene

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Transgenic (1) 
Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
phosphatase binding ISO
Inferred from Sequence Orthology
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein complex scaffold IMP
Inferred from Mutant Phenotype
more info
PubMed 
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
cristae formation ISO
Inferred from Sequence Orthology
more info
 
inner mitochondrial membrane organization ISO
Inferred from Sequence Orthology
more info
 
mitochondrial fusion ISO
Inferred from Sequence Orthology
more info
 
negative regulation of transcription from RNA polymerase II promoter ISO
Inferred from Sequence Orthology
more info
 
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
MICOS complex ISO
Inferred from Sequence Orthology
more info
 
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
extracellular exosome ISO
Inferred from Sequence Orthology
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
mitochondrial inner membrane IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrion ISO
Inferred from Sequence Orthology
more info
 
nucleus ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
MICOS complex subunit Mic19
Names
coiled-coil-helix-coiled-coil-helix domain-containing protein 3, mitochondrial

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_025336.1NP_079612.1  MICOS complex subunit Mic19

    See identical proteins and their annotated locations for NP_079612.1

    Status: PROVISIONAL

    Source sequence(s)
    AK003519
    Consensus CDS
    CCDS19986.1
    UniProtKB/Swiss-Prot
    Q9CRB9
    Related
    ENSMUSP00000070149, OTTMUSP00000015630, ENSMUST00000066379, OTTMUST00000035022
    Conserved Domains (2) summary
    pfam06747
    Location:183217
    CHCH; CHCH domain
    pfam05300
    Location:14175
    DUF737; Protein of unknown function (DUF737)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000072.6 Reference GRCm38.p3 C57BL/6J

    Range
    32792217..33060276 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006506467.2XP_006506530.1  

    Related
    ENSMUSP00000123220, OTTMUSP00000015633, ENSMUST00000127666, OTTMUST00000035025
    Conserved Domains (3) summary
    pfam06747
    Location:188222
    CHCH; CHCH domain
    pfam05300
    Location:14180
    DUF737; Protein of unknown function (DUF737)
    pfam14235
    Location:74145
    DUF4337; Domain of unknown function (DUF4337)
  2. XM_006506468.2XP_006506531.1  

    Related
    ENSMUSP00000110743, OTTMUSP00000015631, ENSMUST00000115091, OTTMUST00000035023
    Conserved Domains (1) summary
    pfam14235
    Location:74145
    DUF4337; Domain of unknown function (DUF4337)

Alternate Mm_Celera

Genomic

  1. AC_000028.1 Alternate Mm_Celera

    Range
    32774244..33045665 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)