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Asph aspartate-beta-hydroxylase [ Mus musculus (house mouse) ]

Gene ID: 65973, updated on 6-Jul-2014
Official Symbol
Asphprovided by MGI
Official Full Name
aspartate-beta-hydroxylaseprovided by MGI
Primary source
MGI:1914186
Locus tag
RP23-152A20.3
See related
Ensembl:ENSMUSG00000028207; Vega:OTTMUSG00000004455
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
BAH; cI-37; C79816; AI848629; AW261690; AW561901; 2310005F16Rik; 3110001L23Rik
See Asph in Epigenomics, MapViewer
Location:
4 A1; 4
Exon count :
30
Annotation release Status Assembly Chr Location
104 current GRCm38.p2 (GCF_000001635.22) 4 NC_000070.6 (9449085..9669340, complement)

Chromosome 4 - NC_000070.6Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102638049 Neighboring gene uncharacterized LOC102638175 Neighboring gene clavesin 1 Neighboring gene NIMA (never in mitosis gene a)-related expressed kinase 2 pseudogene Neighboring gene uncharacterized LOC102638364 Neighboring gene RIKEN cDNA 4930412C18 gene

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
calcium ion binding ISO
Inferred from Sequence Orthology
more info
 
dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 
peptide-aspartate beta-dioxygenase activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
protein binding IPI
Inferred from Physical Interaction
more info
 
Process Evidence Code Pubs
activation of cysteine-type endopeptidase activity ISO
Inferred from Sequence Orthology
more info
 
activation of store-operated calcium channel activity ISO
Inferred from Sequence Orthology
more info
 
calcium ion transmembrane transport ISO
Inferred from Sequence Orthology
more info
 
cellular response to calcium ion ISO
Inferred from Sequence Orthology
more info
 
cytosolic calcium ion homeostasis ISO
Inferred from Sequence Orthology
more info
 
face morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
limb morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
negative regulation of cell proliferation IGI
Inferred from Genetic Interaction
more info
PubMed 
oxidation-reduction process ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
palate development IMP
Inferred from Mutant Phenotype
more info
PubMed 
pattern specification process IMP
Inferred from Mutant Phenotype
more info
PubMed 
peptidyl-amino acid modification IEA
Inferred from Electronic Annotation
more info
 
peptidyl-aspartic acid hydroxylation IDA
Inferred from Direct Assay
more info
PubMed 
positive regulation of calcium ion transport into cytosol ISO
Inferred from Sequence Orthology
more info
 
positive regulation of intracellular protein transport ISO
Inferred from Sequence Orthology
more info
 
positive regulation of proteolysis ISO
Inferred from Sequence Orthology
more info
 
positive regulation of transcription, DNA-templated ISO
Inferred from Sequence Orthology
more info
 
regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity ISO
Inferred from Sequence Orthology
more info
 
regulation of protein depolymerization IDA
Inferred from Direct Assay
more info
 
regulation of protein stability IDA
Inferred from Direct Assay
more info
 
response to ATP ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
cortical endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
cytoplasm IDA
Inferred from Direct Assay
more info
 
endoplasmic reticulum ISO
Inferred from Sequence Orthology
more info
 
integral component of endoplasmic reticulum membrane ISO
Inferred from Sequence Orthology
more info
 
integral component of membrane ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
aspartyl/asparaginyl beta-hydroxylase
Names
aspartyl/asparaginyl beta-hydroxylase
jumbug
junctin
junctate
ASP beta-hydroxylase
aspartyl beta-hydroxylase
aspartate beta-hydroxylase
calsequestrin-binding protein
peptide-aspartate beta-dioxygenase
NP_001171320.1
NP_001171321.1
NP_001171322.1
NP_001171323.1
NP_001171324.1
NP_001171325.1
NP_001171326.1
NP_001171327.1
NP_075553.2
NP_598484.2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001177849.1NP_001171320.1  aspartyl/asparaginyl beta-hydroxylase isoform 3

    Status: VALIDATED

    Description
    Transcript Variant: This variant lacks an alternate, in-frame coding exon, compared to variant 1. The resulting protein (isoform 3) is shorter when it is compared to isoform 1.
    Source sequence(s)
    AK035735, AK049506, AL671970, BY268464
    Consensus CDS
    CCDS51114.1
    UniProtKB/TrEMBL
    A2AL85
    UniProtKB/TrEMBL
    Q8BQK0
    UniProtKB/TrEMBL
    Q8CBM2
    Related
    ENSMUSP00000103977, OTTMUSP00000004841, ENSMUST00000108340, OTTMUST00000010168
    Conserved Domains (4) summary
    pfam05279
    Location:63290
    Blast Score: 662
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    cd00189
    Location:410483
    Blast Score: 119
    TPR; Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, ...
    pfam05118
    Location:556713
    Blast Score: 618
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    pfam13432
    Location:312382
    Blast Score: 123
    TPR_16; Tetratricopeptide repeat
  2. NM_001177850.1NP_001171321.1  aspartyl/asparaginyl beta-hydroxylase isoform 4

    See proteins identical to NP_001171321.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) lacks much of the 3' coding region and contains a different segment for its 3' coding and UTR segments, compared to variant 1. The resulting protein (isoform 4) has a shorter and distinct C-terminus when it is compared to isoform 1.
    Source sequence(s)
    AK030293, AK160984, BP767098, BY268464
    Consensus CDS
    CCDS51116.1
    UniProtKB/TrEMBL
    A2AL81
    UniProtKB/TrEMBL
    Q3TU40
    UniProtKB/Swiss-Prot
    Q8BSY0
    Related
    ENSMUSP00000081978, OTTMUSP00000004844, ENSMUST00000084915, OTTMUST00000010171
    Conserved Domains (1) summary
    pfam05279
    Location:63307
    Blast Score: 634
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
  3. NM_001177851.1NP_001171322.1  aspartyl/asparaginyl beta-hydroxylase isoform 5

    See proteins identical to NP_001171322.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5) lacks an alternate, in-frame exon, much of the 3' coding region and contains a different segment for its 3' coding and UTR segments, compared to variant 1. The resulting protein (isoform 5) has a shorter and distinct C-terminus when it is compared to isoform 1.
    Source sequence(s)
    AK160984, BP767098, BY268464
    Consensus CDS
    CCDS51115.1
    UniProtKB/TrEMBL
    Q3TU40
    Related
    ENSMUSP00000103974, OTTMUSP00000004845, ENSMUST00000108337, OTTMUST00000010172
    Conserved Domains (1) summary
    pfam05279
    Location:63291
    Blast Score: 567
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
  4. NM_001177852.1NP_001171323.1  aspartyl/asparaginyl beta-hydroxylase isoform 6

    Status: VALIDATED

    Description
    Transcript Variant: This variant (6) has multiple differences which result in distinct UTRs and coding end regions, compared to variant 1. The resulting protein (isoform 6) is shorter and has distinct N- and C-termini when it is compared to isoform 1.
    Source sequence(s)
    AK030293, AK030694, AK160984, AL773548, BP767098
    Consensus CDS
    CCDS51112.1
    UniProtKB/TrEMBL
    A2AL75
    UniProtKB/TrEMBL
    Q3TU40
    UniProtKB/Swiss-Prot
    Q8BSY0
    UniProtKB/TrEMBL
    Q9CR06
    Related
    ENSMUSP00000103971, OTTMUSP00000004850, ENSMUST00000108334, OTTMUST00000010179
    Conserved Domains (1) summary
    pfam05279
    Location:25269
    Blast Score: 623
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
  5. NM_001177853.1NP_001171324.1  aspartyl/asparaginyl beta-hydroxylase isoform 7

    Status: VALIDATED

    Description
    Transcript Variant: This variant (7) has multiple differences which result in distinct UTRs and coding end regions, compared to variant 1. The resulting protein (isoform 7) is shorter and has distinct N- and C-termini when it is compared to isoform 1.
    Source sequence(s)
    AK030293, AK030694, AK160984, AL773548, BP767098
    Consensus CDS
    CCDS51113.1
    UniProtKB/TrEMBL
    A2AL76
    UniProtKB/TrEMBL
    Q3TU40
    UniProtKB/Swiss-Prot
    Q8BSY0
    UniProtKB/TrEMBL
    Q9CR06
    Related
    ENSMUSP00000103970, OTTMUSP00000004847, ENSMUST00000108333, OTTMUST00000010174
    Conserved Domains (1) summary
    pfam05279
    Location:25258
    Blast Score: 512
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
  6. NM_001177854.1NP_001171325.1  aspartyl/asparaginyl beta-hydroxylase isoform 9

    Status: VALIDATED

    Description
    Transcript Variant: This variant (9) has multiple differences which result in distinct UTRs and coding end regions, compared to variant 1. The resulting protein (isoform 9) is shorter and has distinct N- and C-termini when it is compared to isoform 1.
    Source sequence(s)
    AK030293, AK030694, AK160984, AL773548, BP767098
    Consensus CDS
    CCDS51111.1
    UniProtKB/TrEMBL
    A2AL74
    UniProtKB/TrEMBL
    Q3TU40
    UniProtKB/Swiss-Prot
    Q8BSY0
    UniProtKB/TrEMBL
    Q9CR06
    Related
    ENSMUSP00000103972, OTTMUSP00000004851, ENSMUST00000108335, OTTMUST00000010180
    Conserved Domains (1) summary
    pfam05279
    Location:25212
    Blast Score: 459
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
  7. NM_001177855.1NP_001171326.1  aspartyl/asparaginyl beta-hydroxylase isoform 8

    Status: VALIDATED

    Description
    Transcript Variant: This variant (8) lacks much of the 3' coding region and contains different segments for its 3' coding and UTR segments, compared to variant 1. The resulting protein (isoform 8) has a shorter and distinct C-terminus when it is compared to isoform 1.
    Source sequence(s)
    AK009170, AK030293, AK030694, BY268464
    Consensus CDS
    CCDS51117.1
    UniProtKB/TrEMBL
    A2AL78
    UniProtKB/Swiss-Prot
    Q8BSY0
    UniProtKB/TrEMBL
    Q9CR06
    UniProtKB/TrEMBL
    Q9D7J8
    Conserved Domains (1) summary
    pfam05279
    Location:63225
    Blast Score: 301
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
  8. NM_001177856.1NP_001171327.1  aspartyl/asparaginyl beta-hydroxylase isoform 10

    See proteins identical to NP_001171327.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (10) has multiple differences which result in a distinct 3' coding region and 3' UTR, compared to variant 1. The resulting protein (isoform 10) is shorter and has a distinct C-terminus when it is compared to isoform 1.
    Source sequence(s)
    AK032420, BC061098, BQ176256, BY268464
    Consensus CDS
    CCDS51118.1
    UniProtKB/TrEMBL
    Q6P8S1
    Related
    ENSMUSP00000116899, OTTMUSP00000004843, ENSMUST00000146441, OTTMUST00000010170
    Conserved Domains (1) summary
    pfam05279
    Location:63155
    Blast Score: 241
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
  9. NM_001290367.1NP_001277296.1  aspartyl/asparaginyl beta-hydroxylase isoform 11 precursor

    See proteins identical to NP_001277296.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (11) differs in the 5' UTR and 5' coding region, initiates translation at a downstream start codon and lacks an alternate in-frame exon in the 5' coding region, compared to variant 1. It encodes isoform 11, which is shorter than isoform 1.
    Source sequence(s)
    AK030293, AK035735, AL671970
    Consensus CDS
    CCDS71341.1
    UniProtKB/Swiss-Prot
    Q8BSY0
    UniProtKB/TrEMBL
    Q8CBM2
    Conserved Domains (4) summary
    pfam05279
    Location:1223
    Blast Score: 620
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    cd00189
    Location:343416
    Blast Score: 119
    TPR; Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, ...
    pfam05118
    Location:489646
    Blast Score: 619
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    pfam13432
    Location:245315
    Blast Score: 124
    TPR_16; Tetratricopeptide repeat
  10. NM_023066.3NP_075553.2  aspartyl/asparaginyl beta-hydroxylase isoform 1

    See proteins identical to NP_075553.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and it encodes the longest protein (isoform 1).
    Source sequence(s)
    AK030293, AL671970, BY268464
    Consensus CDS
    CCDS38690.1
    UniProtKB/Swiss-Prot
    Q8BSY0
    Related
    ENSMUSP00000077273, OTTMUSP00000004808, ENSMUST00000078139, OTTMUST00000010073
    Conserved Domains (4) summary
    pfam05279
    Location:63306
    Blast Score: 731
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    cd00189
    Location:426499
    Blast Score: 119
    TPR; Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, ...
    pfam05118
    Location:572729
    Blast Score: 618
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    pfam13432
    Location:328398
    Blast Score: 122
    TPR_16; Tetratricopeptide repeat
  11. NM_133723.2NP_598484.2  aspartyl/asparaginyl beta-hydroxylase isoform 2

    See proteins identical to NP_598484.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) has multiple differences which result in distinct UTRs and coding end regions, compared to variant 1. The resulting protein (isoform 2) is shorter and has distinct N- and C-termini when it is compared to isoform 1.
    Source sequence(s)
    AK009170, AK030694, AL773548
    Consensus CDS
    CCDS17959.1
    UniProtKB/TrEMBL
    Q9CR06
    UniProtKB/TrEMBL
    Q9D7J8
    Related
    ENSMUSP00000100069, OTTMUSP00000004848, ENSMUST00000103004, OTTMUST00000010175
    Conserved Domains (1) summary
    pfam05279
    Location:25187
    Blast Score: 291
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p2 C57BL/6J

Genomic

  1. NC_000070.6 

    Range
    9449085..9669340
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006538157.1XP_006538220.1  

    Conserved Domains (4) summary
    pfam05279
    Location:1223
    Blast Score: 620
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    cd00189
    Location:343416
    Blast Score: 119
    TPR; Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, ...
    pfam05118
    Location:489646
    Blast Score: 619
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    pfam13432
    Location:245315
    Blast Score: 124
    TPR_16; Tetratricopeptide repeat
  2. XM_006538156.1XP_006538219.1  

    Conserved Domains (4) summary
    pfam05279
    Location:1239
    Blast Score: 688
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    cd00189
    Location:359432
    Blast Score: 119
    TPR; Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, ...
    pfam05118
    Location:505662
    Blast Score: 619
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    pfam13432
    Location:261331
    Blast Score: 123
    TPR_16; Tetratricopeptide repeat
  3. XM_006538155.1XP_006538218.1  

    Conserved Domains (4) summary
    pfam05279
    Location:1254
    Blast Score: 663
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    cd00189
    Location:374447
    Blast Score: 118
    TPR; Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, ...
    pfam05118
    Location:520677
    Blast Score: 620
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    pfam13432
    Location:276346
    Blast Score: 122
    TPR_16; Tetratricopeptide repeat
  4. XM_006538152.1XP_006538215.1  

    Conserved Domains (4) summary
    pfam05279
    Location:63281
    Blast Score: 636
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    cd00189
    Location:401474
    Blast Score: 119
    TPR; Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, ...
    pfam05118
    Location:547704
    Blast Score: 618
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    pfam13432
    Location:303373
    Blast Score: 121
    TPR_16; Tetratricopeptide repeat
  5. XM_006538154.1XP_006538217.1  

    Conserved Domains (4) summary
    pfam05279
    Location:63264
    Blast Score: 502
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    cd00189
    Location:384457
    Blast Score: 118
    TPR; Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, ...
    pfam05118
    Location:530687
    Blast Score: 621
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    pfam13432
    Location:286356
    Blast Score: 122
    TPR_16; Tetratricopeptide repeat
  6. XM_006538150.1XP_006538213.1  

    Conserved Domains (4) summary
    TIGR02795
    Location:315427
    Blast Score: 123
    tol_pal_ybgF; tol-pal system protein YbgF
    pfam05279
    Location:63296
    Blast Score: 610
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    cd00189
    Location:416489
    Blast Score: 118
    TPR; Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, ...
    pfam05118
    Location:562719
    Blast Score: 619
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
  7. XM_006538149.1XP_006538212.1  

    Conserved Domains (4) summary
    pfam05279
    Location:63305
    Blast Score: 637
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    cd00189
    Location:425498
    Blast Score: 118
    TPR; Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, ...
    pfam05118
    Location:571728
    Blast Score: 619
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    pfam13432
    Location:327397
    Blast Score: 122
    TPR_16; Tetratricopeptide repeat
  8. XM_006538148.1XP_006538211.1  

    Conserved Domains (4) summary
    pfam05279
    Location:63321
    Blast Score: 706
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    cd00189
    Location:441514
    Blast Score: 118
    TPR; Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, ...
    pfam05118
    Location:587744
    Blast Score: 619
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    pfam13432
    Location:343413
    Blast Score: 121
    TPR_16; Tetratricopeptide repeat
  9. XM_006538158.1XP_006538221.1  

    Conserved Domains (4) summary
    pfam05279
    Location:25211
    Blast Score: 525
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    cd00189
    Location:331404
    Blast Score: 119
    TPR; Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, ...
    pfam05118
    Location:477634
    Blast Score: 620
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    pfam13432
    Location:233303
    Blast Score: 125
    TPR_16; Tetratricopeptide repeat
  10. XM_006538153.1XP_006538216.1  

    Conserved Domains (4) summary
    pfam05279
    Location:25268
    Blast Score: 728
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    cd00189
    Location:388461
    Blast Score: 119
    TPR; Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, ...
    pfam05118
    Location:534691
    Blast Score: 618
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    pfam13432
    Location:290360
    Blast Score: 123
    TPR_16; Tetratricopeptide repeat
  11. XM_006538151.1XP_006538214.1  

    Conserved Domains (4) summary
    pfam05279
    Location:25283
    Blast Score: 702
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region
    cd00189
    Location:403476
    Blast Score: 118
    TPR; Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, ...
    pfam05118
    Location:549706
    Blast Score: 619
    Asp_Arg_Hydrox; Aspartyl/Asparaginyl beta-hydroxylase
    pfam13432
    Location:305375
    Blast Score: 122
    TPR_16; Tetratricopeptide repeat
  12. XM_006538159.1XP_006538222.1  

    Conserved Domains (1) summary
    pfam05279
    Location:25202
    Blast Score: 272
    Asp-B-Hydro_N; Aspartyl beta-hydroxylase N-terminal region

Alternate Mm_Celera

Genomic

  1. AC_000026.1 

    Range
    9289732..9501866
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

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