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LOC6582039 general transcription factor IIH subunit 4 [ Drosophila mojavensis ]

Gene ID: 6582039, updated on 30-Nov-2023

Summary

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Gene symbol
LOC6582039
Gene description
general transcription factor IIH subunit 4
Locus tag
Dmoj_GI12214
See related
EnsemblRapid:LOC6582039
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila mojavensis
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
Also known as
GI12214; GI12214-PA
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM1815372v1 (GCF_018153725.1) Unplaced Scaffold NW_025318899.1 (10527519..10529325, complement)
101 previous assembly dmoj_caf1 (GCF_000005175.2) Unplaced Scaffold NW_001979115.1 (8055263..8057047, complement)

NW_025318899.1Genomic Context describing neighboring genes Neighboring gene microtubule-associated serine/threonine-protein kinase 1 Neighboring gene probable Ufm1-specific protease 2 Neighboring gene U3 small nucleolar RNA-associated protein 14 homolog A Neighboring gene protein phosphatase 1 regulatory subunit 16A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIH core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIH holo complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor IIH subunit 4
Names
Dmoj\GI12214
Dmoj\GI12214-PA
dmoj_GLEANR_12244

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila mojavensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1815372v1

Genomic

  1. NW_025318899.1 Reference ASM1815372v1

    Range
    10527519..10529325 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002007716.4 → XP_002007752.4  general transcription factor IIH subunit 4

    UniProtKB/TrEMBL
    B4KUK0
    Related
    XP_002007752.4, XM_002007716.4
    Conserved Domains (2) summary
    pfam03849
    Location:65 → 429
    Tfb2; Transcription factor Tfb2
    pfam18307
    Location:450 → 517
    Tfb2_C; Transcription factor Tfb2 (p52) C-terminal domain
Nucleotide Protein
Heading Accession and Version

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