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    Dere\GG15112 [ Drosophila erecta ]

    Gene ID: 6545412, updated on 11-May-2013
    Official Symbol
    Dere\GG15112
    Primary source
    FLYBASE:FBgn0107365
    Locus tag
    Dere_GG15112
    Gene type
    protein coding
    RNA name
    GG15112
    RefSeq status
    PROVISIONAL
    Organism
    Drosophila erecta (strain: TSC#14021-0224.01)
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    dere_GLEANR_15217; GG15112

    NW_001956549.1Genomic Context describing neighboring genes Neighboring gene GG15111 gene product from transcript GG15111-RA Neighboring gene GG14281 gene product from transcript GG14281-RA Neighboring gene GG14280 gene product from transcript GG14280-RA Neighboring gene GG14279 gene product from transcript GG14279-RA

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Assembly reconciliation. Zimin AV, et al. Bioinformatics, 2008 Jan 1. PMID 18057021.
    2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    • Protein processing in endoplasmic reticulum, organism-specific biosystem (from KEGG)
      Protein processing in endoplasmic reticulum, organism-specific biosystemThe endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylate...
    • Protein processing in endoplasmic reticulum, conserved biosystem (from KEGG)
      Protein processing in endoplasmic reticulum, conserved biosystemThe endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylate...

    Homology

    Preferred Names
    GG15112 gene product from transcript GG15112-RA
    Names
    Dere\GG15112-PA
    GG15112
    GG15112-PA

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001956549.1

      Range
      5877143..5879299
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001971675.1 → XP_001971711.1  GG15112 [Drosophila erecta]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B3NFX5
      Conserved Domains (2) summary
      cd00075
      Location:30 – 143
      Blast Score: 102
      HATPase_c; Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins
      pfam00183
      Location:276 – 718
      Blast Score: 1903
      HSP90; Hsp90 protein
    Nucleotide Protein
    Heading Accession and Version
    genomic CH954178.1 EDV50737.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • RefSeq RNAs
        Link to Nucleotide RefSeq RNAs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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