PROCR protein C receptor [Sus scrofa (pig)] - Gene

Summary

Official Symbol: PROCRprovided by VGNC
Official Full Name: protein C receptorprovided by VGNC
Primary source: VGNC:VGNC:96506
See related: Ensembl:ENSSSCG00000026585
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Sus scrofa
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression: Broad expression in ovary (RPKM 19.2), subcutaneous adipose (RPKM 15.0) and 8 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 17

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
106	current	Sscrofa11.1 (GCF_000003025.6)	17	NC_010459.5 (38532530..38537397)
105	previous assembly	Sscrofa10.2 (GCF_000003025.5)	17	NC_010459.4 (43729977..43734533)

Chromosome 17 - NC_010459.5 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Transcriptome data used for gene annotation
Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
BioProject: PRJNA311523
Publication: PMID 27646534
Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables signaling receptor activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in negative regulation of coagulation	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in extracellular space	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: endothelial protein C receptor

Names: protein C receptor, endothelial (EPCR)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001163406.1 → NP_001156878.1 endothelial protein C receptor precursor

See identical proteins and their annotated locations for NP_001156878.1

Status: PROVISIONAL

Source sequence(s)

EF692641

UniProtKB/TrEMBL

A0A4X1T6D5, A0A8D1MAB4, C6EQ34

Related

ENSSSCP00000026282.1, ENSSSCT00000026905.4

Conserved Domains (1) summary

cl08246
Location:31 → 193

MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

NC_010459.5 Reference Sscrofa11.1 Primary Assembly

Range

38532530..38537397

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_021077327.1 → XP_020932986.1 endothelial protein C receptor isoform X1

UniProtKB/TrEMBL

A0A8D0HZD7, A0A8D0I0F2, A0A8D1KTS6, A0A8D1R7G6, I3LQA4

Conserved Domains (1) summary

cl08246
Location:31 → 193

MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2