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LOC6529331 Bardet-Biedl syndrome 4 protein homolog [ Drosophila yakuba ]

Gene ID: 6529331, updated on 7-Dec-2023

Summary

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Gene symbol
LOC6529331
Gene description
Bardet-Biedl syndrome 4 protein homolog
Locus tag
Dyak_GE12854
See related
EnsemblRapid:LOC6529331
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila yakuba
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
GE12854; GE12854-PA
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Genomic context

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Location:
chromosome: 2R
Exon count:
10
Annotation release Status Assembly Chr Location
102 current Prin_Dyak_Tai18E2_2.1 (GCF_016746365.2) 2R NC_052528.2 (4686664..4691091, complement)
101 previous assembly Prin_Dyak_Tai18E2_2.0 (GCF_016746365.1) 2R NC_052528.1 (4686697..4691124, complement)

Chromosome 2R - NC_052528.2Genomic Context describing neighboring genes Neighboring gene G-protein coupled receptor dmsr-1 Neighboring gene uncharacterized LOC6529327 Neighboring gene uncharacterized LOC6529329 Neighboring gene zinc finger protein 316 Neighboring gene probable cytochrome P450 12d1 proximal, mitochondrial Neighboring gene Krueppel-like factor luna Neighboring gene uncharacterized LOC26534618

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Bardet-Biedl syndrome 4 protein homolog
Names
Dyak\GE12854
Dyak\GE12854-PA
dyak_GLEANR_13073

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila yakuba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

Genomic

  1. NC_052528.2 Reference Prin_Dyak_Tai18E2_2.1 Primary Assembly

    Range
    4686664..4691091 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002090300.3 → XP_002090336.1  Bardet-Biedl syndrome 4 protein homolog

    See identical proteins and their annotated locations for XP_002090336.1

    UniProtKB/TrEMBL
    B4P7L3
    Related
    XP_002090336.1, XM_002090300.3
    Conserved Domains (4) summary
    sd00006
    Location:283 → 311
    TPR; TPR repeat [structural motif]
    pfam13414
    Location:283 → 348
    TPR_11; TPR repeat
    pfam13424
    Location:97 → 175
    TPR_12; Tetratricopeptide repeat
    pfam14559
    Location:190 → 254
    TPR_19; Tetratricopeptide repeat
Nucleotide Protein Strain
Heading Accession and Version

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