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Rpl23 ribosomal protein L23 [ Mus musculus (house mouse) ]

Gene ID: 65019, updated on 28-May-2016
Official Symbol
Rpl23provided by MGI
Official Full Name
ribosomal protein L23provided by MGI
Primary source
MGI:MGI:1929455
See related
Ensembl:ENSMUSG00000071415 Vega:OTTMUSG00000002776
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2810009A01Rik
Orthologs
Location:
11 D; 11 61.1 cM
Exon count:
5
Annotation release Status Assembly Chr Location
105 current GRCm38.p3 (GCF_000001635.23) 11 NC_000077.6 (97777526..97782439, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (97638840..97643753, complement)

Chromosome 11 - NC_000077.6Genomic Context describing neighboring genes Neighboring gene nuclear encoded tRNA cysteine 18 (anticodon GCA) Neighboring gene RIKEN cDNA 1700001P01 gene Neighboring gene small nucleolar RNA, H/ACA box 21 Neighboring gene nuclear encoded tRNA cysteine 56 (anticodon GCA) Neighboring gene nuclear encoded tRNA cysteine 51 (anticodon GCA)

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
large ribosomal subunit rRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
poly(A) RNA binding ISO
Inferred from Sequence Orthology
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
 
structural constituent of ribosome ISA
Inferred from Sequence Alignment
more info
PubMed 
Process Evidence Code Pubs
translation ISA
Inferred from Sequence Alignment
more info
PubMed 
Component Evidence Code Pubs
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
cytosolic large ribosomal subunit ISO
Inferred from Sequence Orthology
more info
 
cytosolic ribosome ISA
Inferred from Sequence Alignment
more info
PubMed 
extracellular exosome ISO
Inferred from Sequence Orthology
more info
 
focal adhesion ISO
Inferred from Sequence Orthology
more info
 
intracellular ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
membrane ISO
Inferred from Sequence Orthology
more info
 
nucleolus IDA
Inferred from Direct Assay
more info
PubMed 
ribosome ISO
Inferred from Sequence Orthology
more info
 

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_022891.3NP_075029.1  60S ribosomal protein L23

    See identical proteins and their annotated locations for NP_075029.1

    Status: VALIDATED

    Source sequence(s)
    AK012694, AK018730, CF612967, CN840510
    Consensus CDS
    CCDS25331.1
    UniProtKB/Swiss-Prot
    P62830
    Related
    ENSMUSP00000099435, OTTMUSP00000002656, ENSMUST00000103146, OTTMUST00000005561
    Conserved Domains (1) summary
    PTZ00054
    Location:2139
    PTZ00054; 60S ribosomal protein L23; Provisional

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm38.p3 C57BL/6J

Genomic

  1. NC_000077.6 Reference GRCm38.p3 C57BL/6J

    Range
    97777526..97782439 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Mm_Celera

Genomic

  1. AC_000033.1 Alternate Mm_Celera

    Range
    107427049..107431962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)