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    PINK1 PTEN induced putative kinase 1 [ Homo sapiens (human) ]

    Gene ID: 65018, updated on 22-May-2013
    Official Symbol
    PINK1provided by HGNC
    Official Full Name
    PTEN induced putative kinase 1provided by HGNC
    Primary source
    HGNC:14581
    See related
    Ensembl:ENSG00000158828; HPRD:10514; MIM:608309; Vega:OTTHUMG00000002841
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    BRPK; PARK6
    Summary
    This gene encodes a serine/threonine protein kinase that localizes to mitochondria. It is thought to protect cells from stress-induced mitochondrial dysfunction. Mutations in this gene cause one form of autosomal recessive early-onset Parkinson disease. [provided by RefSeq, Jul 2008]
    Location :
    1p36
    Sequence :
    Chromosome: 1; NC_000001.10 (20959948..20978004)
    See PINK1 in Epigenomics, MapViewer

    Chromosome 1 - NC_000001.10Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 43, member B Neighboring gene cytidine deaminase Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) Neighboring gene kinesin family member 17

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Parkinson disease 6, autosomal recessive early-onset

    Summary from GeneReviews: Parkinson Disease Overview Go to GeneReviews

    Disease Characteristics
    Parkinsonism refers to all clinical states characterized by tremor, muscle rigidity, and slowed movement (bradykinesia). Parkinson disease is the primary and most common form of parkinsonism. Psychiatric manifestations, which include depression and visual hallucinations, are common but not uniformly present. Dementia eventually occurs in at least 20% of cases. Generally, individuals with onset before age 20 years are considered to have juvenile-onset Parkinson disease, those with onset before age 50 years are classified as having early-onset Parkinson disease, and those with onset after age 50 years are considered to have late-onset Parkinson disease.
    Diagnosis Testing
    The diagnosis of Parkinson disease is based solely on the clinical findings of tremor, rigidity, and bradykinesia. A good response to levodopa and asymmetric onset of limb involvement are generally regarded as supporting diagnostic features. The cardinal pathologic feature of Parkinson disease is the loss of dopaminergic neurons in the substantia nigra with intracytoplasmic inclusions (Lewy bodies) in the remaining, intact nigral neurons. The genetic cause of some forms of Parkinson disease has been identified. Seven disease genes have been implicated. Mutations in three known genes, SNCA (PARK1), UCHL1 (PARK5), and LRRK2 (PARK8) and one mapped gene (PARK3) result in autosomal dominant Parkinson disease. Mutations in three known genes, PARK2 (PARK2), PARK7 (PARK7), and PINK1 (PARK6), result in autosomal recessive Parkinson disease. Three susceptibility genes have been identified. Molecular genetic testing is clinically available for PARK2 (the gene encoding parkin), PINK1, PARK7, SNCA, and LRRK2.
    Genetic Counseling
    Parkinson disease can be inherited in an autosomal dominant or autosomal recessive manner; however, most cases of Parkinson disease are thought to result from the effects of multiple genes as well as environmental risk factors. Genetic counseling of affected individuals and their family members must be done on a family-by-family basis. The risk to first-degree relatives of a person with Parkinson disease varies from study to study and from country to country. In families with a non-mendelian form of Parkinson disease, first-degree relatives of an affected individual are between 2.7 and 3.5 times more likely to develop Parkinson disease than individuals without a family history of Parkinson disease. Their cumulative lifetime risk of developing Parkinson disease is therefore between 3% and 7%.
    References

    Summary from GeneReviews: PINK1 Type of Young-Onset Parkinson Disease Go to GeneReviews

    Disease Characteristics
    The PINK1 type of young-onset Parkinson disease is characterized by variable combinations of rigidity, bradykinesia, and rest tremor, often making it clinically indistinguishable from idiopathic Parkinson disease. Lower-limb dystonia may be a presenting sign. Onset usually occurs in the third or fourth decade. The disease is slowly progressive. Clinical signs vary; hyperreflexia may be present and abnormal behavior and/or psychiatric manifestations have been described. Dyskinesias as a result of treatment with levodopa frequently occur, as with all individuals with young-onset disease, regardless of the underlying genetic cause.
    Diagnosis Testing
    The diagnosis of the PINK1 type of young-onset Parkinson disease is considered primarily in individuals with early-onset parkinsonism (age <40 years), particularly if autosomal recessive inheritance is suspected. PINK1, the gene encoding the protein PINK1, is the only gene in which mutations are known to cause PINK1 type of young-onset Parkinson disease. Molecular genetic testing is available on a clinical basis. Mutation detection frequency varies by family history and age of onset. The diagnosis of the PINK1 type of young-onset Parkinson disease can be confirmed only when disease-causing mutations are identified on both alleles of PINK1 (i.e., the individual is homozygous for the same disease-causing allele or compound heterozygous for two different disease-causing alleles).
    Genetic Counseling
    The PINK1 type of young-onset Parkinson disease is inherited in an autosomal recessive manner. At conception, each sib of a proband has a 25% chance of being affected, a 50% chance of being a carrier, and a 25% chance of being unaffected and not a carrier. Each unaffected sib has a 2/3 chance of being a carrier. Carrier testing for at-risk relatives and prenatal testing for pregnancies at increased risk are possible if both disease-causing alleles have been identified in an affected family member.
    References
    Products Interactant Other Gene Complex Source Pubs Description
    Q9BXM7 Q9BXM7 PINK1    HPRD  PubMed  
    BioGRID:122376 BioGRID:106710 AKT1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:122376 BioGRID:116312 CDC37    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:122376 BioGRID:116124 COPS8    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:122376 BioGRID:109552 HSP90AA1    BioGRID  PubMed Affinity Capture-Luminescence; Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:122376 BioGRID:109558 HSP90AB1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:122376 BioGRID:109540 HSPA4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:122376 BioGRID:118165 HTRA2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:122376 BioGRID:109863 IRAK1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:122376 BioGRID:114048 IRS4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:122376 BioGRID:110030 KIF11    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:122376 BioGRID:110304 MAP1B    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:122376 BioGRID:124137 MAP1LC3A    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:122376 BioGRID:112748 MAP3K7    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity 
    BioGRID:122376 BioGRID:122551 MAPKAP1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:122376 BioGRID:108326 MARK2    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Two-hybrid 
    BioGRID:122376 BioGRID:110815 NEDD8    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:122376 BioGRID:111105 PARK2    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Phenotypic Suppression; Reconstituted Complex 
    BioGRID:122376 BioGRID:116446 PARK7    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:122376 BioGRID:120678 PARL    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:122376 BioGRID:128154 PGAM5    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western; Biochemical Activity 
    BioGRID:122376 BioGRID:122376 PINK1    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity 
    BioGRID:122376 BioGRID:111577 PRKDC    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:122376 BioGRID:111679 PSMC6    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:122376 BioGRID:111680 PSMD1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:122376 BioGRID:111681 PSMD2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:122376 BioGRID:111700 PTEN    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:122376 BioGRID:120576 RHOT1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:122376 BioGRID:128962 RICTOR    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:122376 BioGRID:125819 SENP8    BioGRID  PubMed Biochemical Activity 
    BioGRID:122376 BioGRID:112506 SNCA    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:122376 BioGRID:114986 SNCAIP    BioGRID  PubMed Two-hybrid 
    BioGRID:122376 BioGRID:119978 TOLLIP    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:122376 BioGRID:115144 TOMM20    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:122376 BioGRID:121308 TOMM22    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:122376 BioGRID:115716 TOMM40    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:122376 BioGRID:115201 TOMM70A    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:122376 BioGRID:113041 TRAF6    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:122376 BioGRID:113603 TUBA1A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:122376 BioGRID:128444 TUBB    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:122376 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:122376 BioGRID:114504 UBE2M    BioGRID  PubMed Affinity Capture-MS; Biochemical Activity 
    • Parkinson's disease, organism-specific biosystem (from KEGG)
      Parkinson's disease, organism-specific biosystemParkinson's disease (PD) is a progressive neurodegenerative movement disorder that results primarily from the death of dopaminergic neurons in the substantia nigra. Mutations in alpha-synuclein, UCHL...
    • Parkinsons Disease Pathway, organism-specific biosystem (from WikiPathways)
      Parkinsons Disease Pathway, organism-specific biosystemMost people with Parkinson's disease have idiopathic Parkinson's disease (having no specific known cause). A small proportion of cases, however, can be attributed to known genetic factors. Mutations ...

    Markers

    Homology

    Clone Names

    • FLJ27236

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    ATP binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    C3HC4-type RING finger domain binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    calcium-dependent protein kinase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    kinase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    magnesium ion binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
     
    protein serine/threonine kinase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    ubiquitin protein ligase binding IPI
    Inferred from Physical Interaction
    more info
     
    Process Evidence Code Pubs
    cell death IEA
    Inferred from Electronic Annotation
    more info
     
    cellular response to toxic substance IEA
    Inferred from Electronic Annotation
    more info
     
    intracellular protein kinase cascade IDA
    Inferred from Direct Assay
    more info
    PubMed 
    mitochondrion degradation IMP
    Inferred from Mutant Phenotype
    more info
     
    negative regulation of neuron apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    peptidyl-serine phosphorylation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    positive regulation of I-kappaB kinase/NF-kappaB cascade IDA
    Inferred from Direct Assay
    more info
    PubMed 
    positive regulation of dopamine secretion IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of release of cytochrome c from mitochondria IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    positive regulation of synaptic transmission, dopaminergic IEA
    Inferred from Electronic Annotation
    more info
     
    protein phosphorylation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    regulation of protein complex assembly IDA
    Inferred from Direct Assay
    more info
    PubMed 
    regulation of protein ubiquitination IDA
    Inferred from Direct Assay
    more info
    PubMed 
    response to stress IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Component Evidence Code Pubs
    cytosol IDA
    Inferred from Direct Assay
    more info
    PubMed 
    integral to membrane IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrial outer membrane IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrion IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Preferred Names
    serine/threonine-protein kinase PINK1, mitochondrial
    Names
    serine/threonine-protein kinase PINK1, mitochondrial
    protein kinase BRPK
    PTEN-induced putative kinase protein 1
    NP_115785.1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_008164.1 RefSeqGene

      Range
      5001..23057
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_032409.2NP_115785.1  serine/threonine-protein kinase PINK1, mitochondrial precursor

      Status: REVIEWED

      Source sequence(s)
      AB053323, AL391357
      Consensus CDS
      CCDS211.1
      UniProtKB/Swiss-Prot
      Q9BXM7
      Related
      ENSP00000364204, OTTHUMP00000002881, ENST00000321556, OTTHUMT00000007954
      Conserved Domains (1) summary
      cd00180
      Location:271501
      Blast Score: 281
      PKc; Catalytic domain of Protein Kinases

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000001.10 Reference GRCh37.p10 Primary Assembly

      Range
      20959948..20978004
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000133.1 Alternate HuRef

      Range
      19206074..19224136
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018912.1 Alternate CHM1_1.0

      Range
      21170741..21188797
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

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