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MPTX1 mucosal pentraxin 1 (pseudogene) [ Homo sapiens (human) ]

Gene ID: 649458, updated on 8-Nov-2023

Summary

Official Symbol
MPTX1provided by HGNC
Official Full Name
mucosal pentraxin 1 (pseudogene)provided by HGNC
Primary source
HGNC:HGNC:48364
See related
Ensembl:ENSG00000215846 AllianceGenome:HGNC:48364
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MPTX
Summary
Predicted to enable metal ion binding activity. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
1q23.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (159276507..159277182)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (158413540..158414215)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (159246297..159246972)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene cell adhesion molecule 3 Neighboring gene CADM3 antisense RNA 1 Neighboring gene atypical chemokine receptor 1 (Duffy blood group) Neighboring gene olfactory receptor family 10 subfamily J member 2 pseudogene Neighboring gene Fc epsilon receptor Ia

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_027744.1 

    Range
    101..776
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    159276507..159277182
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791759.1 Reference GRCh38.p14 PATCHES

    Range
    28333..29008
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    158413540..158414215
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)