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    NMNAT1 nicotinamide nucleotide adenylyltransferase 1 [ Homo sapiens (human) ]

    Gene ID: 64802, updated on 11-May-2013
    Official Symbol
    NMNAT1provided by HGNC
    Official Full Name
    nicotinamide nucleotide adenylyltransferase 1provided by HGNC
    Primary source
    HGNC:17877
    Locus tag
    RP11-807G9.1
    See related
    Ensembl:ENSG00000173614; HPRD:16369; MIM:608700; Vega:OTTHUMG00000001799
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    LCA9; NMNAT; PNAT1
    Summary
    This gene encodes an enzyme which catalyzes a key step in the biosynthesis of the coenzyme NAD. The encoded protein is one of several nicotinamide nucleotide adenylyltransferases. Studies in Drosophila and mammalian neurons have shown the encoded protein can confer protection to damaged neurons. This protection requires enzymatic activity which increases NAD levels and activates a nuclear deacetylase which is the protective molecule. Pseudogenes of this gene are located on chromosomes 1, 3, 4, 14 and 15. [provided by RefSeq, Dec 2011]
    Location :
    1p36.22
    Sequence :
    Chromosome: 1; NC_000001.10 (10003486..10045556)
    See NMNAT1 in Epigenomics, MapViewer

    Chromosome 1 - NC_000001.10Genomic Context describing neighboring genes Neighboring gene catenin, beta interacting protein 1 Neighboring gene leucine zipper and CTNNBIP1 domain containing Neighboring gene microRNA 5697 Neighboring gene retinol binding protein 7, cellular Neighboring gene ubiquitination factor E4B Neighboring gene ribosomal protein L21 pseudogene 21

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Leber congenital amaurosis 9

    Summary from GeneReviews: Leber Congenital Amaurosis Go to GeneReviews

    Disease Characteristics
    Leber congenital amaurosis (LCA), a severe dystrophy of the retina, typically becomes evident in the first year of life. Visual function is usually poor and often accompanied by nystagmus, sluggish or near-absent pupillary responses, photophobia, high hyperopia, and keratoconus. Visual acuity is rarely better than 20/400. A characteristic finding is Franceschetti's oculo-digital sign, comprising eye poking, pressing, and rubbing. The appearance of the fundus is extremely variable. While the retina may initially appear normal, a pigmentary retinopathy reminiscent of retinitis pigmentosa is frequently observed later in childhood. The electroretinogram (ERG) is characteristically "nondetectable" or severely subnormal.
    Diagnosis Testing
    The diagnosis of LCA is established by clinical findings. Molecular genetic testing is clinically available for the 17genes in which mutations are known to cause LCA: GUCY2D (locus name: LCA1), RPE65 (LCA2), SPATA7 (LCA3), AIPL1 (LCA4), LCA5 (LCA5), RPGRIP1 (LCA6), CRX (LCA7), CRB1 (LCA8), NMNAT1 (LCA9), CEP290 (LCA10), IMPDH1 (LCA11), RD3 (LCA12), RDH12 (LCA13), LRAT (LCA14), TULP1 (LCA15), KCNJ13 (LCA16), and IQCB1. Together, mutations in these genes are estimated to account for over half of all LCA diagnoses. At least one other disease locus for LCA has been reported, but the gene is not known.
    Genetic Counseling
    Most often LCA is inherited in an autosomal recessive manner. At conception, each sib of an individual with recessively inherited LCA has a 25% chance of being affected, a 50% chance of being an asymptomatic carrier, and a 25% chance of being unaffected and not a carrier. Carrier testing for at-risk family members and prenatal testing for pregnancies at increased risk may be possible if the disease-causing mutations in the family are known. Rarely, LCA is inherited in an autosomal dominant manner as a result of mutations within CRX; the possibility of autosomal dominant inheritance resulting from a de novo CRX mutation should be considered in individuals with LCA and no family history of the disease.
    References
    Protein Gene Interaction Pubs
    Rev, p19 rev HIV-1 Rev interacting protein, nicotinamide nucleotide adenylyltransferase 1 (NMNAT1), is identified by the in-vitro binding experiments involving cytosolic or nuclear extracts from HeLa cells. The interaction of Rev with NMNAT1 is increased by RRE PubMed

    Go to the HIV-1, Human Protein Interaction Database

    Products Interactant Other Gene Complex Source Pubs Description
    Q9HAN9 Q9HAN9 NMNAT1    HPRD  PubMed  
    BioGRID:122308 BioGRID:106848 APP    BioGRID  PubMed Reconstituted Complex 
    BioGRID:122308 BioGRID:108608 FLOT2    BioGRID  PubMed Two-hybrid 
    BioGRID:122308 BioGRID:110593 MSX1    BioGRID  PubMed Two-hybrid 
    BioGRID:122308 BioGRID:110827 NEK3    BioGRID  PubMed Two-hybrid 
    BioGRID:122308 BioGRID:110970 NTRK2    BioGRID  PubMed Two-hybrid 
    BioGRID:122308 BioGRID:127260 SIK1    BioGRID  PubMed Two-hybrid 
    BioGRID:122308 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:122308 BioGRID:1205542 rev    BioGRID  PubMed Affinity Capture-MS 

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    nicotinamide-nucleotide adenylyltransferase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nicotinamide-nucleotide adenylyltransferase activity TAS
    Traceable Author Statement
    more info
     
    nicotinate-nucleotide adenylyltransferase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    NAD biosynthetic process IC
    Inferred by Curator
    more info
    PubMed 
    NAD biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    NAD metabolic process TAS
    Traceable Author Statement
    more info
     
    response to wounding IEA
    Inferred from Electronic Annotation
    more info
     
    small molecule metabolic process TAS
    Traceable Author Statement
    more info
     
    vitamin metabolic process TAS
    Traceable Author Statement
    more info
     
    water-soluble vitamin metabolic process TAS
    Traceable Author Statement
    more info
     
    Component Evidence Code Pubs
    nucleoplasm TAS
    Traceable Author Statement
    more info
     
    nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Preferred Names
    nicotinamide mononucleotide adenylyltransferase 1
    Names
    nicotinamide mononucleotide adenylyltransferase 1
    NMN adenylyltransferase 1
    NaMN adenylyltransferase 1
    pyridine nucleotide adenylyltransferase 1
    nicotinate-nucleotide adenylyltransferase 1
    NP_073624.2

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_032954.1 RefSeqGene

      Range
      5001..47071
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_022787.3NP_073624.2  nicotinamide mononucleotide adenylyltransferase 1

      Status: REVIEWED

      Source sequence(s)
      AL603962, BG751629, BP339298
      Consensus CDS
      CCDS108.1
      UniProtKB/Swiss-Prot
      Q9HAN9
      Related
      ENSP00000366410, OTTHUMP00000001731, ENST00000377205, OTTHUMT00000005029
      Conserved Domains (2) summary
      TIGR00482
      Location:12254
      Blast Score: 423
      TIGR00482; nicotinate (nicotinamide) nucleotide adenylyltransferase
      cd09286
      Location:9254
      Blast Score: 970
      NMNAT_Eukarya; Nicotinamide/nicotinate mononucleotide adenylyltransferase, Eukaryotic

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000001.10 Reference GRCh37.p10 Primary Assembly

      Range
      10003486..10045556
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000133.1 Alternate HuRef

      Range
      9158939..9200537
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018912.1 Alternate CHM1_1.0

      Range
      10021310..10063528
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

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