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tufB elongation factor Tu [ Stenotrophomonas maltophilia K279a ]

Gene ID: 6394454, updated on 6-Jul-2014
Gene symbol
tufB
Gene description
elongation factor Tu
Locus tag
Smlt0890
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Stenotrophomonas maltophilia K279a (strain: K279a)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group
Sequence:
NC_010943.1 (936711..937901)

NC_010943.1Genomic Context describing neighboring genes Neighboring gene tRNA Neighboring gene tRNA Neighboring gene tRNA Neighboring gene preprotein translocase subunit SecE

Miscellaneous features

  • Loc: 936738-937328 HMMPfam hit to PF00009, Elongation factor Tu GTP binding domain, score 2.2e-97 inference = protein motif:HMMPfam:PF00009
  • Loc: 937389-937598 HMMPfam hit to PF03144, Elongation factor Tu domain, score 1e-27 inference = protein motif:HMMPfam:PF03144
  • Loc: 937611-937895 HMMPfam hit to PF03143, Elongation factor Tu C-terminal domain, score 7.4e-60 inference = protein motif:HMMPfam:PF03143
Names
elongation factor Tu
YP_001970775.1
  • EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010943.1 

    Range
    936711..937901
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001970775.1 elongation factor Tu [Stenotrophomonas maltophilia K279a]

    See proteins identical to YP_001970775.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B2FQ31
    Conserved Domains (4) summary
    cd01884
    Location:11205
    EF_Tu; Elongation Factor Tu (EF-Tu) GTP-binding proteins
    PRK00049
    Location:1396
    PRK00049; elongation factor Tu; Reviewed
    cd03697
    Location:213299
    EFTU_II; EFTU_II: Elongation factor Tu domain II. Elongation factors Tu (EF-Tu) are three-domain GTPases with an essential function in the elongation phase of mRNA translation. The GTPase center of EF-Tu is in the N-terminal domain (domain I), also known as the ...
    cd03707
    Location:302391
    EFTU_III; Domain III of elongation factor (EF) Tu. Ef-Tu consists of three structural domains, designated I, II and III. Domain III adopts a beta barrel structure. Domain III is involved in binding to both charged tRNA and binding to elongation factor Ts (EF-Ts). ...