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    BGN biglycan [ Homo sapiens ]

    Gene ID: 633, updated on 29-Jan-2012

    Summary

    Official Symbol
    BGNprovided by HGNC
    Official Full Name
    biglycanprovided by HGNC
    Primary source
    HGNC:1044
    See related
    Ensembl:ENSG00000182492; HPRD:02359; MIM:301870; Vega:OTTHUMG00000024205
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    PGI; DSPG1; PG-S1; SLRR1A
    Summary
    The protein encoded by this gene is a small cellular or pericellular matrix proteoglycan that is closely related in structure to two other small proteoglycans, decorin and fibromodulin. The encoded protein and decorin are thought to be the result of a gene duplication. Decorin contains one attached glycosaminoglycan chain, while this protein probably contains two chains. For this reason, this protein is called biglycan. This protein plays a role in assembly of collagen fibrils and muscle regeneration. It interacts with several proteins involved in muscular dystrophy, including alpha-dystroglycan, alpha- and gamma-sarcoglycan and collagen VI, and it is critical for the assembly of the dystrophin-associated protein complex. [provided by RefSeq, Nov 2009]

    Genomic context

    Location :
    Xq28
    Sequence :
    Chromosome: X; NC_000023.10 (152760347..152775004)

    Chromosome X - NC_000023.10Genomic Context describing neighboring genes Neighboring gene HAUS augmin-like complex, subunit 7 Neighboring gene extracellular matrix protein 2-like Neighboring gene ATPase, Ca++ transporting, plasma membrane 3 Neighboring gene family with sequence similarity 58, member A

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    NP_001702.1 CHRD    BIND  PubMed BGN (hBgn) interacts with an unspecified isoform of CHRD (Chd). This interaction was modeled on a demonstrated interaction between human BGN and CHRD from an unspecified species. 
    NP_001702.1     BIND  PubMed BGN (hBgn) interacts with BMP4/BMP4. This interaction was modeled on a demonstrated interaction between human BGN and BMP4/BMP4 from an unspecified species. 
    P21810 P04114 APOB    HPRD  PubMed  
    P21810 P05067 APP    HPRD  PubMed  
    P21810 P12644 BMP4    HPRD  PubMed  
    P21810 P02452 COL1A1    HPRD  PubMed  
    P21810 P08123 COL1A2    HPRD  PubMed  
    P21810 P02458 COL2A1    HPRD  PubMed  
    P21810 P08572 COL4A2    HPRD  PubMed  
    P21810 Q14118 DAG1    HPRD  PubMed  
    P21810 P15502 ELN    HPRD  PubMed  
    P21810 P55001 MFAP2    HPRD  PubMed  
    P21810 P04054 PLA2G1B    HPRD  PubMed  
    P21810 P01137 TGFB1    HPRD  PubMed  
    P21810 P01375 TNF    HPRD  PubMed  
    P21810 O95388 WISP1    HPRD  PubMed  
    BioGRID:107102 BioGRID:106835 APOB    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107102 BioGRID:106848 APP    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107102 BioGRID:108321 ELN    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107102 BioGRID:119758 HLN2    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107102 BioGRID:121492 JPH3    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107102 BioGRID:110395 MFAP2    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107102 BioGRID:112340 SGCA    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107102 BioGRID:112898 TGFB1    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107102 BioGRID:112979 TNF    BioGRID  PubMed Reconstituted Complex 

    General gene information

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    extracellular matrix binding IEA
    Inferred from Electronic Annotation
    more info
     
    extracellular matrix structural constituent NAS
    Non-traceable Author Statement
    more info
    PubMed 
    glycosaminoglycan binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    blood vessel remodeling IEA
    Inferred from Electronic Annotation
    more info
     
    peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cell surface IEA
    Inferred from Electronic Annotation
    more info
     
    colocalizes_with extracellular matrix IDA
    Inferred from Direct Assay
    more info
     
    extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    intracellular part IEA
    Inferred from Electronic Annotation
    more info
     
    proteinaceous extracellular matrix NAS
    Non-traceable Author Statement
    more info
    PubMed 
    sarcolemma IEA
    Inferred from Electronic Annotation
    more info
     
    transport vesicle IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    biglycan
    Names
    biglycan
    biglycan proteoglycan
    bone/cartilage proteoglycan I
    bone/cartilage proteoglycan-I
    small leucine-rich protein 1A
    dermatan sulphate proteoglycan I

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_015961.1 RefSeqGene

      Range
      4937..19594
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001711.4NP_001702.1  biglycan preproprotein

      Status: REVIEWED

      Source sequence(s)
      AI538325, AI570205, BC002416, DC299956, DC419932, DC425011
      Consensus CDS
      CCDS14721.1
      UniProtKB/Swiss-Prot
      P21810
      Related
      ENSP00000327336, OTTHUMP00000025928, ENST00000331595, OTTHUMT00000060981
      Conserved Domains (3) summary
      cl15309
      Location:95321
      Blast Score: 105
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      pfam13855
      Location:93150
      Blast Score: 130
      LRR_8; Leucine rich repeat
      cl02423
      Location:6294
      Blast Score: 140
      LRRNT; Leucine rich repeat N-terminal domain

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000023.10 Reference GRCh37.p5 Primary Assembly

      Range
      152760347..152775004
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000155.1 Alternate HuRef

      Range
      141428414..141433357
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

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