Sign in to NCBI

Display Settings:

Format

Send to:

Choose Destination
We are sorry, but NCBI web applications do not support your browser and may not function properly. More information

    xccb100_4257 hypothetical protein [ Xanthomonas campestris pv. campestris str. B100 ]

    Gene ID: 6324035, updated on 17-Oct-2012
    Gene symbol
    xccb100_4257
    Gene description
    hypothetical protein
    Locus tag
    xccb100_4257
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xanthomonas campestris pv. campestris str. B100 (strain: B100, pathovar: campestris)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas
    Old locus tag
    xcc-b100_4257
    Sequence :
    NC_010688.1 (4813414..4814496, complement)

    NC_010688.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene PpiC-type peptidyl-prolyl cis-trans isomerase Neighboring gene acetate permease Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis. Vorhölter FJ, et al. J Biotechnol, 2008 Mar 20. PMID 18304669.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    hypothetical protein

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_010688.1

      Range
      4813414..4814496, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_001905662.1 hypothetical protein xccb100_4257 [Xanthomonas campestris pv. campestris str. B100]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B0RYU1
      Conserved Domains (2) summary
      COG0584
      Location:48 – 223
      Blast Score: 178
      UgpQ; Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
      cd08566
      Location:53 – 346
      Blast Score: 339
      GDPD_AtGDE_like; Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins
    Nucleotide Protein
    Heading Accession and Version
    genomic AM920689.1 CAP53627.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

      Related sites

      Feedback

      Subscription

      Recent activity

      Clear Turn Off Turn On

      Your browsing activity is empty.

      Activity recording is turned off.

      Turn recording back on

      See more...