Display Settings:

Format

Send to:

Choose Destination
We are sorry, but NCBI web applications do not support your browser and may not function properly. More information

    ATXN1 ataxin 1 [ Homo sapiens (human) ]

    Gene ID: 6310, updated on 13-Jun-2013
    Official Symbol
    ATXN1provided by HGNC
    Official Full Name
    ataxin 1provided by HGNC
    Primary source
    HGNC:10548
    See related
    Ensembl:ENSG00000124788; HPRD:03333; MIM:601556; Vega:OTTHUMG00000014303
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ATX1; SCA1; D6S504E
    Summary
    The autosomal dominant cerebellar ataxias (ADCA) are a heterogeneous group of neurodegenerative disorders characterized by progressive degeneration of the cerebellum, brain stem and spinal cord. Clinically, ADCA has been divided into three groups: ADCA types I-III. ADCAI is genetically heterogeneous, with five genetic loci, designated spinocerebellar ataxia (SCA) 1, 2, 3, 4 and 6, being assigned to five different chromosomes. ADCAII, which always presents with retinal degeneration (SCA7), and ADCAIII often referred to as the `pure' cerebellar syndrome (SCA5), are most likely homogeneous disorders. Several SCA genes have been cloned and shown to contain CAG repeats in their coding regions. ADCA is caused by the expansion of the CAG repeats, producing an elongated polyglutamine tract in the corresponding protein. The expanded repeats are variable in size and unstable, usually increasing in size when transmitted to successive generations. The function of the ataxins is not known. This locus has been mapped to chromosome 6, and it has been determined that the diseased allele contains 41-81 CAG repeats, compared to 6-39 in the normal allele, and is associated with spinocerebellar ataxia type 1 (SCA1). At least two transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jan 2010]
    Location :
    6p23
    Sequence :
    Chromosome: 6; NC_000006.11 (16299343..16761721, complement)
    See ATXN1 in Epigenomics, MapViewer

    Chromosome 6 - NC_000006.11Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L42 pseudogene 2 Neighboring gene guanosine monophosphate reductase Neighboring gene stathmin domain containing 1 Neighboring gene RNA binding motif protein 24

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Spinocerebellar ataxia 1

    Summary from GeneReviews: Spinocerebellar Ataxia Type 1 Go to GeneReviews

    Disease Characteristics
    Spinocerebellar ataxia type 1 (SCA1) is characterized by progressive cerebellar ataxia, dysarthria, and eventual deterioration of bulbar functions. Early in the disease, affected individuals may have gait disturbance, slurred speech, difficulty with balance, brisk deep tendon reflexes, hypermetric saccades, nystagmus, and mild dysphagia. Later signs include slowing of saccadic velocity, development of up-gaze palsy, dysmetria, dysdiadochokinesia, and hypotonia. In advanced stages, muscle atrophy, decreased deep tendon reflexes, loss of proprioception, cognitive impairment (e.g., frontal executive dysfunction, impaired verbal memory), chorea, dystonia, and bulbar dysfunction are seen. Onset is typically in the third or fourth decade, although childhood onset and late adult onset have been reported. Those with onset over age 60 years may manifest a pure cerebellar phenotype. Interval from onset to death varies from ten to 30 years; individuals with juvenile onset show more rapid progression and more severe disease. Anticipation is observed. An axonal sensory neuropathy detected by electrophysiologic testing is common; brain imaging typically shows cerebellar and brain stem atrophy.
    Diagnosis Testing
    The diagnosis of SCA1 rests on the result of molecular genetic testing to detect an abnormal CAG trinucleotide repeat expansion in ATXN1. Affected individuals have alleles with 39 or more CAG trinucleotide repeats. Such testing detects 100% of cases.
    Genetic Counseling
    SCA1 is inherited in an autosomal dominant manner. Offspring of an affected individual have a 50% chance of inheriting the expanded allele. Prenatal diagnosis for at-risk pregnancies is possible if the diagnosis has been confirmed by molecular genetic testing in an affected relative; however, requests for prenatal testing of typically adult-onset diseases are not common.
    References
    Products Interactant Other Gene Complex Source Pubs Description
    P54253 Q13085 ACACA    HPRD  PubMed  
    P54253 O00154 ACOT7    HPRD  PubMed  
    P54253 O43306 ADCY6    HPRD  PubMed  
    P54253 AT hook DNA binding motif containing 1 AHDC1    HPRD  PubMed  
    P54253 P31749 AKT1    HPRD  PubMed  
    P54253 Q8IWG5 ANKHD1    HPRD  PubMed  
    P54253 P39687 ANP32A    HPRD  PubMed  
    P54253 O00213 APBB1    HPRD  PubMed  
    P54253 RICS ARHGAP32    HPRD  PubMed  
    P54253 AT rich interactive domain 5A ARID5A    HPRD  PubMed  
    P54253 P13637 ATP1A3    HPRD  PubMed  
    P54253 P61421 ATP6V0D1    HPRD  PubMed  
    P54253 P54253 ATXN1    HPRD  PubMed  
    P54253 Q99700 ATXN2    HPRD  PubMed  
    P54253 Q8WWM7 ATXN2L    HPRD  PubMed  
    P54253 Basic leucine zipper transcription factor, ATF-like 2 BATF2    HPRD  PubMed  
    P54253 Q8NDZ0 BEND2    HPRD  PubMed  
    P54253 Q14201 BTG3    HPRD  PubMed  
    P54253 Q6P1W5 C1orf94    HPRD  PubMed  
    P54253 Coiled-coil domain containing 136 CCDC136    HPRD  PubMed  
    P54253 O75909 CCNK    HPRD  PubMed  
    P54253 Q00534 CDK6    HPRD  PubMed  
    P54253 P23528 CFL1    HPRD  PubMed  
    P54253 Q96RK0 CIC    HPRD  PubMed  
    P54253 Q14011 CIRBP    HPRD  PubMed  
    P54253 Q8N2M8 CLASRP    HPRD  PubMed  
    P54253 Q8N1N0 CLEC4F    HPRD  PubMed  
    P54253 P38432 COIL    HPRD  PubMed  
    P54253 Pre-mRNA cleavage factor I, 59 kDa subunit CPSF7    HPRD  PubMed  
    P54253 P46108 CRK    HPRD  PubMed  
    P54253 P01034 CST3    HPRD  PubMed  
    P54253 Q15038 DAZAP2    HPRD  PubMed  
    P54253 O75935 DCTN3    HPRD  PubMed  
    P54253 Q09013 DMPK    HPRD  PubMed  
    P54253 Q96EY1 DNAJA3    HPRD  PubMed  
    P54253 Q86Y13 DZIP3    HPRD  PubMed  
    P54253 O95967 EFEMP2    HPRD  PubMed  
    P54253 O14602 EIF1AY    HPRD  PubMed  
    P54253 Q9NRA8 EIF4ENIF1    HPRD  PubMed  
    P54253 Q8TE02 ELP5    HPRD  PubMed  
    P54253 O75354 ENTPD6    HPRD  PubMed  
    P54253 Hypothetical protein FLJ10404 FAM193B    HPRD  PubMed  
    P54253 Q9Y4E1 FAM21C    HPRD  PubMed  
    P54253 Q96IP4 FAM46A    HPRD  PubMed  
    P54253 Q96A09 FAM46B    HPRD  PubMed  
    P54253 FATJ FAT4    HPRD  PubMed  
    P54253 P14324 FDPS    HPRD  PubMed  
    P54253 Q14192 FHL2    HPRD  PubMed  
    P54253 P06241 FYN    HPRD  PubMed  
    P54253 P04406 GAPDH    HPRD  PubMed  
    P54253 P28676 GCA    HPRD  PubMed  
    P54253 P16383 GCFC2    HPRD  PubMed  
    P54253 Q9UKD1 GMEB2    HPRD  PubMed  
    P54253 Q9UKJ3 GPATCH8    HPRD  PubMed  
    P54253 P15170 GSPT1    HPRD  PubMed  
    P54253 P15822 HIVEP1    HPRD  PubMed  
    P54253 P37235 HPCAL1    HPRD  PubMed  
    P54253 LW 1 HSFX1    HPRD  PubMed  
    P54253 Heat shock 70 KD protein 1A HSPA1A    HPRD  PubMed  
    P54253 Chromosome 16 open reading frame 7 IL34    HPRD  PubMed  
    P54253 O15397 IPO8    HPRD  PubMed  
    P54253 P53990 IST1    HPRD  PubMed  
    P54253 P16144 ITGB4    HPRD  PubMed  
    P54253 Q92993 KAT5    HPRD  PubMed  
    P54253 Q92794 KAT6A    HPRD  PubMed  
    P54253 Q13303 KCNAB2    HPRD  PubMed  
    P54253 Chromosome 11 open reading frame 41 KIAA1549L    HPRD  PubMed  
    P54253 Q4VXA2 KIAA2026    HPRD  PubMed  
    P54253 O14901 KLF11    HPRD  PubMed  
    P54253 Q53G59 KLHL12    HPRD  PubMed  
    P54253 Q9P2G9 KLHL8    HPRD  PubMed  
    P54253 Q9UMN6 KMT2B    HPRD  PubMed  
    P54253 Q86U70 LDB1    HPRD  PubMed  
    P54253 Q6UWE0 LRSAM1    HPRD  PubMed  
    P54253 O00339 MATN2    HPRD  PubMed  
    P54253 P02686 MBP    HPRD  PubMed  
    P54253 Q96RN5 MED15    HPRD  PubMed  
    P54253 FLJ20859 protein METTL17    HPRD  PubMed  
    P54253 Q15800 MSMO1    HPRD  PubMed  
    P54253 Q7Z6M4 MTERFD2    HPRD  PubMed  
    P54253 Q92614 MYO18A    HPRD  PubMed  
    P54253 O43776 NARS    HPRD  PubMed  
    P54253 O75376 NCOR1    HPRD  PubMed  
    P54253 Q9UBE8 NLK    HPRD  PubMed  
    P54253 P22736 NR4A1    HPRD  PubMed  
    P54253 O43809 NUDT21    HPRD  PubMed  
    P54253 Q9Y6R0 NUMBL    HPRD  PubMed  
    P54253 P54368 OAZ1    HPRD  PubMed  
    P54253 P32243 OTX2    HPRD  PubMed  
    P54253 P12955 PEPD    HPRD  PubMed  
    P54253 Q9NRX4 PHPT1    HPRD  PubMed  
    P54253 Q9P1W9 PIM2    HPRD  PubMed  
    P54253 Q9Y2N3 POM121    HPRD  PubMed  
    P54253 O75170 PPP6R2    HPRD  PubMed  
    P54253 O60828 PQBP1    HPRD  PubMed  
    P54253 O75626 PRDM1    HPRD  PubMed  
    P54253 P48634 PRRC2A    HPRD  PubMed  
    P54253 KIAA0515 protein PRRC2B    HPRD  PubMed  
    P54253 P17980 PSMC3    HPRD  PubMed  
    P54253 P41222 PTGDS    HPRD  PubMed  
    P54253 Q14671 PUM1    HPRD  PubMed  
    P54253 Q2TAL8 QRICH1    HPRD  PubMed  
    P54253 Q15032 R3HDM1    HPRD  PubMed  
    P54253 Q9Y2K5 R3HDM2    HPRD  PubMed  
    P54253 RAD54-like 2 RAD54L2    HPRD  PubMed  
    P54253 Q8WZA2 RAPGEF4    HPRD  PubMed  
    P54253 Ataxin 2 binding protein 1 RBFOX1    HPRD  PubMed  
    P54253 O43251 RBFOX2    HPRD  PubMed  
    P54253 Q93062 RBPMS    HPRD  PubMed  
    P54253 Q15293 RCN1    HPRD  PubMed  
    P54253 Homeo box protein PEPP subfamily 2 RHOXF2    HPRD  PubMed  
    P54253 Q96EP0 RNF31    HPRD  PubMed  
    P54253 Q9NR31 SAR1A    HPRD  PubMed  
    P54253 Q9BYW2 SETD2    HPRD  PubMed  
    P54253 Q86VZ5 SGMS1    HPRD  PubMed  
    P54253 Q8N196 SIX5    HPRD  PubMed  
    P54253 Organic solute transporter alpha SLC51A    HPRD  PubMed  
    P54253 Q8TAQ2 SMARCC2    HPRD  PubMed  
    P54253 Q96T58 SPEN    HPRD  PubMed  
    P54253 P36956 SREBF1    HPRD  PubMed  
    P54253 ST6GALNAC6 protein ST6GALNAC6    HPRD  PubMed  
    P54253 Q6ZMT1 STAC2    HPRD  PubMed  
    P54253 Q8IX01 SUGP2    HPRD  PubMed  
    P54253 Q8NEM7 SUPT20H    HPRD  PubMed  
    P54253 Q9NX95 SYBU    HPRD  PubMed  
    P54253 Q92609 TBC1D5    HPRD  PubMed  
    P54253 O15273 TCAP    HPRD  PubMed  
    P54253 Q9H0E2 TOLLIP    HPRD  PubMed  
    P54253 O94842 TOX4    HPRD  PubMed  
    P54253 Q12933 TRAF2    HPRD  PubMed  
    P54253 Q13049 TRIM32    HPRD  PubMed  
    P54253 Q15654 TRIP6    HPRD  PubMed  
    P54253 Q6DKK2 TTC19    HPRD  PubMed  
    P54253 P26368 U2AF2    HPRD  PubMed  
    P54253 Q14157 UBAP2L    HPRD  PubMed  
    P54253 Q969T4 UBE2E3    HPRD  PubMed  
    P54253 P63279 UBE2I    HPRD  PubMed  
    P54253 Q9NRR5 UBQLN4    HPRD  PubMed  
    P54253 Q70EL1 USP54    HPRD  PubMed  
    P54253 Q93009 USP7    HPRD  PubMed  
    P54253 P62760 VSNL1    HPRD  PubMed  
    P54253 Q96N03 VSTM2L    HPRD  PubMed  
    P54253 Q6IFS5 WNK1    HPRD  PubMed  
    P54253 Q9Y3S1 WNK2    HPRD  PubMed  
    P54253 P62258 YWHAE    HPRD  PubMed  
    P54253 P63104 YWHAZ    HPRD  PubMed  
    P54253 Q9H869 YY1AP1    HPRD  PubMed  
    P54253 Q9Y2Y4 ZBTB32    HPRD  PubMed  
    P54253 Q96K80 ZC3H10    HPRD  PubMed  
    P54253 Q9UGR2 ZC3H7B    HPRD  PubMed  
    P54253 Q8WW36 ZCCHC13    HPRD  PubMed  
    P54253 Q9UKY1 ZHX1    HPRD  PubMed  
    P54253 Q9Y6X8 ZHX2    HPRD  PubMed  
    P54253 Q9H4I2 ZHX3    HPRD  PubMed  
    P54253 Q8N554 ZNF276    HPRD  PubMed  
    P54253 Q96MN9 ZNF488    HPRD  PubMed  
    P54253 O15014 ZNF609    HPRD  PubMed  
    P54253 Q7Z570 ZNF804A    HPRD  PubMed  
    P54253 KIAA0913 protein ZSWIM8    HPRD  PubMed  
    P54253 Q15942 ZYX    HPRD  PubMed  
    BioGRID:112217 BioGRID:106549 ACACA    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116460 ACOT7    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:106625 ADCY6    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:106633 ADD3    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:118093 AHDC1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:120230 ANKHD1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:113791 ANP32A    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:106819 APBB1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115091 ARHGAP32    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116074 ARID5A    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:106932 ASNS    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116487 ATF5    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:106968 ATP1A3    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:114564 ATP6V0D1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:112217 ATXN1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:131172 ATXN1L    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:112218 ATXN2    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:116429 ATXN2L    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:122958 BAALC    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115680 BASP1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:125470 BATF2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:126543 BEND2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116150 BTG3    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:124400 C1orf94    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:135911 C2orf27B    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:107266 CAMK2B    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:122267 CCDC136    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:114339 CCNK    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:118998 CDIP1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:107456 CDK6    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:107499 CFL1    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:107561 CHRNA7    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116767 CIC    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:107573 CIRBP    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116302 CLASRP    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:107595 CLCN2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:127914 CLEC4F    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:113815 COIL    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex; Two-hybrid 
    BioGRID:112217 BioGRID:122957 CPSF7    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:107780 CREM    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:107787 CRIP2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:107788 CRK    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:107798 CRY2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:107853 CST3    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:117303 CXorf27    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115143 DAZAP2    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:116418 DCTN3    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:128508 DHRSX    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:121684 DHX37    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:124542 DIXDC1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:108100 DMPK    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:114547 DNAJA3    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:123062 DOCK5    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115021 DZIP3    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:119026 EFEMP2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:122908 EHMT1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:114542 EIF1AY    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115578 EIF1B    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:114214 EIF3F    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:121148 EIF4ENIF1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:117122 ELP5    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:107393 ENTPD6    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:108405 ESRRA    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:108419 ETV4    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:120027 FAM193B    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:128984 FAM21C    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:120744 FAM46A    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:125440 FAM46B    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:123936 FAR1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:122763 FAT4    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:108517 FDPS    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:108565 FHL2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:113742 FOSL1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:114451 FUBP3    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:108810 FYN    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:108868 GAPDH    BioGRID  PubMed Reconstituted Complex; Two-hybrid 
    BioGRID:112217 BioGRID:121770 GATAD1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:117333 GCA    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:112797 GCFC2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116697 GGA2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:117605 GMEB2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116749 GPATCH8    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:109190 GSPT1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115106 HDAC4    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:112217 BioGRID:117045 HEY2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:117714 HEYL    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:113946 HIST1H3A    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:109343 HIVEP1    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:124985 HNRNPLL    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:109481 HPCAL1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:325062 HSFX1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:109535 HSPA1A    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:109540 HSPA4    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:112217 BioGRID:109544 HSPA8    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:112217 BioGRID:109703 IGF2R    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:126985 IL34    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116190 ILVBL    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116185 IMMT    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115781 IPO8    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115141 IST1    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:109897 ITGB4    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:113703 KAT6A    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:114086 KCNAB2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:122506 KCTD15    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:117301 KIAA1549L    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:127672 KIAA2026    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:110033 KIF22    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:114040 KLF11    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:121890 KLHL12    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:121618 KLHL8    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115104 KMT2B    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:110120 LASP1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:114384 LDB1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:114893 LITAF    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:135084 LOC401442    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:110200 LOXL1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:114611 LPAR2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:124754 LRSAM1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:130398 MAGEB18    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:110287 MAGEB2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:127710 MAGEB6    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:110317 MATN2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:110325 MBP    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:119623 MED15    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:122261 METTL17    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:122113 MLST8    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:112214 MSMO1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:110594 MSX2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:126263 MTERFD2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:119124 MYEF2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:112217 BioGRID:134384 MYO18A    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:110758 NARS    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:110764 NCAM1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:114973 NCOR1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:114974 NCOR2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:119685 NLK    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:117962 NPHP3    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:109407 NR4A1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116237 NUDT21    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:114677 NUMBL    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:609665 NUTM2B    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:111000 OAZ1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:111026 OPCML    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:111055 OTX2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:111208 PEPD    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:118854 PHPT1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:114124 PIAS1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116228 PIM2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:121807 PLEKHB1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115214 POM121    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:111467 PPAT    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115053 PPP6R2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115393 PQBP1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:112217 BioGRID:107108 PRDM1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:113646 PRRC2A    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:124226 PRRC2B    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:111675 PSMC3    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:111695 PSPH    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:111702 PTGDS    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115050 PUM1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:114834 QKI    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:120219 QRICH1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:117065 R3HDM1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116532 R3HDM2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116750 RAD54L2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115965 RAI2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:109146 RAPGEF1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116253 RAPGEF4    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:120107 RBFOX1    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:117087 RBFOX2    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:122035 RBM26    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116220 RBPMS    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:111887 RCN1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:124119 RHOXF2    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:120389 RNF31    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:121186 SAR1A    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:121738 SEMA4G    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:118845 SETD2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:113368 SF1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:129227 SGMS1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:127096 SIX5    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:124902 SLC25A51    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:112413 SLC4A2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:128357 SLC51A    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:112431 SLC6A13    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:112485 SMARCC2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116655 SPEN    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:112598 SREBF1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:112599 SREBF2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:119039 ST6GALNAC6    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:131192 STAC2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115548 STAM2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115563 STUB1    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity 
    BioGRID:112217 BioGRID:115449 SUGP2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:113188 SUMO1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:112217 BioGRID:120729 SUPT20H    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115229 SV2A    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:120776 SYBU    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115123 TBC1D5    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:114127 TCAP    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:127996 TCEANC    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:112848 TCTA    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:119615 TDP2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:119266 TMX2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:119978 TOLLIP    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115144 TOMM20    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:115209 TOX4    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:114913 TP53I11    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:113038 TRAF2    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:116608 TRIM32    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:115738 TRIM38    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:113056 TRIP6    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:113099 TSC1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:120248 TTC19    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116466 U2AF2    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:115227 UBAP2L    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:112217 BioGRID:113172 UBE2E1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex; Two-hybrid 
    BioGRID:112217 BioGRID:115740 UBE2E3    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:113177 UBE2I    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:121223 UBQLN4    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116706 UHRF1BP1L    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:125434 UHRF2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:124536 UNK    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:127739 USP54    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:113622 USP7    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:113286 VSNL1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:126121 VSTM2L    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:123518 WBSCR16    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:122403 WNK1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:122423 WNK2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:113363 YWHAE    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:120540 YY1AP1    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:117964 ZBTB32    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:124317 ZC3H10    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116866 ZC3H7B    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:133309 ZCCHC13    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116406 ZHX1    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:112217 BioGRID:116549 ZHX2    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116688 ZHX3    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:124982 ZNF276    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:125620 ZNF488    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116695 ZNF609    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:124875 ZNF804A    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:129825 ZSCAN1    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:116690 ZSWIM8    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:122653 ZXDC    BioGRID  PubMed Two-hybrid 
    BioGRID:112217 BioGRID:113569 ZYX    BioGRID  PubMed Two-hybrid 

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    poly(G) RNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    poly(U) RNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    protein C-terminus binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    protein self-association IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    RNA processing NAS
    Non-traceable Author Statement
    more info
    PubMed 
    adult locomotory behavior IEA
    Inferred from Electronic Annotation
    more info
     
    cell death IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of insulin-like growth factor receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of phosphorylation IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of transcription, DNA-dependent IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nuclear export IDA
    Inferred from Direct Assay
    more info
    PubMed 
    positive regulation of transcription from RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of excitatory postsynaptic membrane potential IEA
    Inferred from Electronic Annotation
    more info
     
    transcription, DNA-dependent IEA
    Inferred from Electronic Annotation
    more info
     
    visual learning IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cytoplasm IDA
    Inferred from Direct Assay
    more info
     
    intracellular membrane-bounded organelle IDA
    Inferred from Direct Assay
    more info
     
    colocalizes_with nuclear RNA export factor complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nuclear inclusion body IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nuclear matrix IDA
    Inferred from Direct Assay
    more info
    PubMed 
    NOT nucleolus IDA
    Inferred from Direct Assay
    more info
     
    nucleoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleus IDA
    Inferred from Direct Assay
    more info
     
    Preferred Names
    ataxin-1
    Names
    ataxin-1
    spinocerebellar ataxia type 1 protein

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_011571.1 RefSeqGene

      Range
      5001..467379
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_000332.3NP_000323.2  ataxin-1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 both encode the same protein.
      Source sequence(s)
      AL009031, BC011026, X79204
      Consensus CDS
      CCDS34342.1
      UniProtKB/Swiss-Prot
      P54253
      UniProtKB/TrEMBL
      Q96FF1
      Related
      ENSP00000244769, OTTHUMP00000016065, ENST00000244769, OTTHUMT00000039943
      Conserved Domains (2) summary
      pfam08517
      Location:574688
      Blast Score: 532
      AXH; Ataxin-1 and HBP1 module (AXH)
      pfam12547
      Location:415445
      Blast Score: 95
      ATXN-1_C; Capicua transcriptional repressor modulator
    2. NM_001128164.1NP_001121636.1  ataxin-1

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 both encode the same protein.
      Source sequence(s)
      AL009031, BC011026, BP365416, X79204
      Consensus CDS
      CCDS34342.1
      UniProtKB/Swiss-Prot
      P54253
      UniProtKB/TrEMBL
      Q96FF1
      Related
      ENSP00000416360, ENST00000436367
      Conserved Domains (2) summary
      pfam08517
      Location:574688
      Blast Score: 532
      AXH; Ataxin-1 and HBP1 module (AXH)
      pfam12547
      Location:415445
      Blast Score: 95
      ATXN-1_C; Capicua transcriptional repressor modulator

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000006.11 Reference GRCh37.p10 Primary Assembly

      Range
      16299343..16761721, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000138.1 Alternate HuRef

      Range
      16246641..16707370, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018917.1 Alternate CHM1_1.0

      Range
      16222105..16684763, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

      Supplemental Content

      Recent activity

      Your browsing activity is empty.

      Activity recording is turned off.

      Turn recording back on

      See more...