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    Rpic_3403 GntR family transcriptional regulator [ Ralstonia pickettii 12J ]

    Gene ID: 6289644, updated on 18-May-2013
    Gene symbol
    Rpic_3403
    Gene description
    GntR family transcriptional regulator
    Locus tag
    Rpic_3403
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ralstonia pickettii 12J (strain: 12J)
    Lineage
    Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia
    Location :
    chromosome: 1
    Sequence :
    Chromosome: 1; NC_010682.1 (3563783..3565252)

    Chromosome 1 - NC_010682.1Genomic Context describing neighboring genes Neighboring gene general secretion pathway protein F Neighboring gene hypothetical protein Neighboring gene indolepyruvate ferredoxin oxidoreductase Neighboring gene exonuclease I

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Names
    GntR family transcriptional regulator
    YP_001900956.1
    • PFAM: regulatory protein GntR HTH; aminotransferase class I and II~KEGG: rso:RSc3119 probable transcription regulator protein

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_010682.1

      Range
      3563783..3565252
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_001900956.1 GntR family transcriptional regulator [Ralstonia pickettii 12J]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B2UFZ7
      Conserved Domains (3) summary
      cd00609
      Location:124482
      Blast Score: 490
      AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
      cd07377
      Location:2788
      Blast Score: 147
      WHTH_GntR; Winged helix-turn-helix (WHTH) DNA-binding domain of the GntR family of transcriptional regulators
      COG1167
      Location:27489
      Blast Score: 1011
      ARO8; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

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