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GARRE1 granule associated Rac and RHOG effector 1 [ Bos taurus (cattle) ]

Gene ID: 617808, updated on 5-Mar-2024

Summary

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Official Symbol
GARRE1provided by VGNC
Official Full Name
granule associated Rac and RHOG effector 1provided by VGNC
Primary source
VGNC:VGNC:30550
See related
BGD:BT13665; Ensembl:ENSBTAG00000013175
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
KIAA0355
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 18
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (44691421..44776252)

Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene LSM14A mRNA processing body assembly factor Neighboring gene U6 spliceosomal RNA Neighboring gene T-box transcription factor T-like Neighboring gene uncharacterized LOC132342838 Neighboring gene uncharacterized LOC132342837 Neighboring gene glucose-6-phosphate isomerase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CCR4-NOT complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rac protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
granule associated Rac and RHOG effector protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001206284.2 → NP_001193213.2  granule associated Rac and RHOG effector protein 1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000018
    UniProtKB/TrEMBL
    E1BGL2
    Related
    ENSBTAP00000017535.6, ENSBTAT00000017535.7
    Conserved Domains (1) summary
    pfam15923
    Location:59 → 187
    DUF4745; Domain of unknown function (DUF4745)

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    44691421..44776252
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005219028.5 → XP_005219085.2  granule associated Rac and RHOG effector protein 1 isoform X1

    UniProtKB/TrEMBL
    E1BGL2
    Conserved Domains (1) summary
    pfam15923
    Location:59 → 187
    DUF4745; Domain of unknown function (DUF4745)

  2. XM_005219027.5 → XP_005219084.2  granule associated Rac and RHOG effector protein 1 isoform X1

    UniProtKB/TrEMBL
    E1BGL2
    Conserved Domains (1) summary
    pfam15923
    Location:59 → 187
    DUF4745; Domain of unknown function (DUF4745)

  3. XM_024978542.2 → XP_024834310.1  granule associated Rac and RHOG effector protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1LLM2
    Related
    ENSBTAP00000057485.1, ENSBTAT00000077960.2
    Conserved Domains (1) summary
    pfam15923
    Location:59 → 187
    DUF4745; Domain of unknown function (DUF4745)
Nucleotide Protein Strain
Heading Accession and Version

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