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alr alanine racemase [ Clavibacter michiganensis subsp. sepedonicus ]

Gene ID: 6158590, updated on 25-Oct-2014
Gene symbol
alr
Gene description
alanine racemase
Locus tag
CMS_0520
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Clavibacter michiganensis subsp. sepedonicus (strain: ATCC33113, sub-species: sepedonicus)
Lineage
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Micrococcineae; Microbacteriaceae; Clavibacter
Old locus tag
CMS0520
Sequence:
NC_010407.1 (548777..549934)

NC_010407.1Genomic Context describing neighboring genes Neighboring gene pantothenate kinase Neighboring gene glucosamine--fructose-6-phosphate aminotransferase Neighboring gene 4'-phosphopantetheinyl transferase Neighboring gene alanine racemase fusion protein Neighboring gene hypothetical protein Neighboring gene glycoprotein peptidase-acetyltransferase fusionprotein Neighboring gene hypothetical protein

Miscellaneous features

  • Loc: 548816-549493 HMMPfam hit to PF01168, Alanine racemase,N-terminal, score 1e-67 inference = protein motif:HMMPfam:PF01168
  • Loc: 548900-548932 PS00395 Alanine racemase pyridoxal-phosphate attachment site.
  • Loc: 549530-549928 HMMPfam hit to PF00842, Alanine racemase,C-terminal, score 7.8e-42 inference = protein motif:HMMPfam:PF00842

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_010407.1 

    Range
    548777..549934
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_001709291.1 alanine racemase [Clavibacter michiganensis subsp. sepedonicus]

    See proteins identical to YP_001709291.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B0RD40
    Conserved Domains (2) summary
    cd00430
    Location:17382
    PLPDE_III_AR; Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase
    PRK00053
    Location:16381
    alr; alanine racemase; Reviewed