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    parA chromosome partitioning protein [ Clavibacter michiganensis subsp. sepedonicus ]

    Gene ID: 6157115, updated on 18-May-2013
    Gene symbol
    parA
    Gene description
    chromosome partitioning protein
    Locus tag
    CMS_1252
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Clavibacter michiganensis subsp. sepedonicus (strain: ATCC33113, sub-species: sepedonicus)
    Lineage
    Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Micrococcineae; Microbacteriaceae; Clavibacter
    Old locus tag
    CMS1252
    Sequence :
    NC_010407.1 (1312997..1313881)

    NC_010407.1Genomic Context describing neighboring genes Neighboring gene CTP synthetase Neighboring gene nudix hydrolase Neighboring gene site-specific tyrosine recombinase XerD Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene RNA pseudouridine synthase Neighboring gene prephenate dehydrogenase

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Genome of the actinomycete plant pathogen Clavibacter michiganensis subsp. sepedonicus suggests recent niche adaptation. Bentley SD, et al. J Bacteriol, 2008 Mar. PMID 18192393.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction

    Miscellaneous features

    • Loc: 1313123-1313773 HMMPfam hit to PF01656, Cobyrinic acid a,c-diamide synthase, score 1.1e-51 inference = protein motif:HMMPfam:PF01656
    Names
    chromosome partitioning protein

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_010407.1

      Range
      1312997..1313881
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_001709990.1 chromosome partitioning protein [Clavibacter michiganensis subsp. sepedonicus]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B0RHF1
      Conserved Domains (2) summary
      COG1192
      Location:40 – 290
      Blast Score: 639
      Soj; ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]
      cd02042
      Location:157 – 222
      Blast Score: 185
      ParA; ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the ...
    Nucleotide Protein
    Heading Accession and Version
    genomic AM849034.1 CAQ01368.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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