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SCAI suppressor of cancer cell invasion [ Canis lupus familiaris (dog) ]

Gene ID: 612887, updated on 5-Mar-2024

Summary

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Official Symbol
SCAIprovided by VGNC
Official Full Name
suppressor of cancer cell invasionprovided by VGNC
Primary source
VGNC:VGNC:111712
See related
Ensembl:ENSCAFG00845009946
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
20
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (58845385..59011277)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (57124828..57289680)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (58011467..58176812)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (57604632..57770289)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (57921148..58086095)

Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L27a-like Neighboring gene mitochondrial import inner membrane translocase subunit TIM14-like Neighboring gene protein phosphatase 6 catalytic subunit Neighboring gene 40S ribosomal protein S20-like Neighboring gene golgin A1 Neighboring gene actin related protein 2/3 complex subunit 5 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SCAI; LOW QUALITY PROTEIN: protein SCAI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051813.1 Reference ROS_Cfam_1.0

    Range
    58845385..59011277
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038678607.1 → XP_038534535.1  protein SCAI isoform X1

    UniProtKB/TrEMBL
    A0A8C0MDU3, A0A8C0TEP2
    Related
    ENSCAFP00845013614.1, ENSCAFT00845017490.1
    Conserved Domains (1) summary
    pfam12070
    Location:64 → 557
    SCAI; Protein SCAI

  2. XM_038678609.1 → XP_038534537.1  protein SCAI isoform X2

    UniProtKB/TrEMBL
    A0A8C0R1Y4
    Conserved Domains (1) summary
    pfam12070
    Location:43 → 536
    SCAI; Protein SCAI

  3. XM_038678608.1 → XP_038534536.1  protein SCAI isoform X2

    UniProtKB/TrEMBL
    A0A8C0R1Y4
    Conserved Domains (1) summary
    pfam12070
    Location:43 → 536
    SCAI; Protein SCAI

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049269.1 Alternate UMICH_Zoey_3.1

    Range
    57604632..57770289
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038487441.1 → XP_038343369.1  LOW QUALITY PROTEIN: protein SCAI isoform X1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

    Range
    57921148..58086095
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038613316.1 → XP_038469244.1  protein SCAI isoform X1

    Conserved Domains (1) summary
    pfam12070
    Location:64 → 557
    SCAI; Protein SCAI

  2. XM_038613318.1 → XP_038469246.1  protein SCAI isoform X2

    Conserved Domains (1) summary
    pfam12070
    Location:43 → 536
    SCAI; Protein SCAI

  3. XM_038613317.1 → XP_038469245.1  protein SCAI isoform X2

    Conserved Domains (1) summary
    pfam12070
    Location:43 → 536
    SCAI; Protein SCAI

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

    Range
    58011467..58176812
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038549373.1 → XP_038405301.1  protein SCAI isoform X1

    UniProtKB/TrEMBL
    A0A8C0MDU3, A0A8C0TEP2
    Conserved Domains (1) summary
    pfam12070
    Location:64 → 557
    SCAI; Protein SCAI

  2. XM_038549375.1 → XP_038405303.1  protein SCAI isoform X2

    UniProtKB/TrEMBL
    A0A8C0R1Y4
    Conserved Domains (1) summary
    pfam12070
    Location:43 → 536
    SCAI; Protein SCAI

  3. XM_038549374.1 → XP_038405302.1  protein SCAI isoform X2

    UniProtKB/TrEMBL
    A0A8C0R1Y4
    Conserved Domains (1) summary
    pfam12070
    Location:43 → 536
    SCAI; Protein SCAI

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    57124828..57289680
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_846887.6 → XP_851980.2  protein SCAI isoform X1

    See identical proteins and their annotated locations for XP_851980.2

    UniProtKB/TrEMBL
    A0A8C0MDU3, A0A8C0TEP2
    Conserved Domains (1) summary
    pfam12070
    Location:64 → 557
    SCAI; Protein SCAI

  2. XM_022423833.2 → XP_022279541.1  protein SCAI isoform X2

    UniProtKB/TrEMBL
    A0A8C0R1Y4
    Conserved Domains (1) summary
    pfam12070
    Location:43 → 536
    SCAI; Protein SCAI

  3. XM_022423832.2 → XP_022279540.1  protein SCAI isoform X2

    UniProtKB/TrEMBL
    A0A8C0R1Y4
    Conserved Domains (1) summary
    pfam12070
    Location:43 → 536
    SCAI; Protein SCAI
Nucleotide Protein
Heading Accession and Version

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