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CDKN2AIP CDKN2A interacting protein [ Canis lupus familiaris (dog) ]

Gene ID: 607991, updated on 5-Mar-2024

Summary

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Official Symbol
CDKN2AIPprovided by VGNC
Official Full Name
CDKN2A interacting proteinprovided by VGNC
Primary source
VGNC:VGNC:39070
See related
Ensembl:ENSCAFG00845016463
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 16 NC_051820.1 (49122256..49126587, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 16 NC_006598.4 (47332264..47336599, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 16 NC_049237.1 (47834077..47838409, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 16 NC_049276.1 (47084374..47088704, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 16 NC_049757.1 (47699883..47704220, complement)

Chromosome 16 - NC_051820.1Genomic Context describing neighboring genes Neighboring gene RWD domain containing 4 Neighboring gene uncharacterized LOC111090347 Neighboring gene inhibitor of growth family member 2 Neighboring gene small nucleolar RNA SNORA70 Neighboring gene 40S ribosomal protein S27-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CDKN2A-interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051820.1 Reference ROS_Cfam_1.0

    Range
    49122256..49126587 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038690259.1 → XP_038546187.1  CDKN2A-interacting protein isoform X2

    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD

  2. XM_038690260.1 → XP_038546188.1  CDKN2A-interacting protein isoform X3

    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD

  3. XM_038690258.1 → XP_038546186.1  CDKN2A-interacting protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0N6Q3, A0A8C0QTZ6, A0A8I3P857
    Related
    ENSCAFP00845022979.1, ENSCAFT00845029217.1
    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD

  4. XM_038690261.1 → XP_038546189.1  CDKN2A-interacting protein isoform X4

    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049276.1 Alternate UMICH_Zoey_3.1

    Range
    47084374..47088704 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038497967.1 → XP_038353895.1  CDKN2A-interacting protein isoform X2

    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD

  2. XM_038497968.1 → XP_038353896.1  CDKN2A-interacting protein isoform X3

    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD

  3. XM_038497966.1 → XP_038353894.1  CDKN2A-interacting protein isoform X1

  4. XM_038497969.1 → XP_038353897.1  CDKN2A-interacting protein isoform X4

    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049757.1 Alternate UNSW_CanFamBas_1.0

    Range
    47699883..47704220 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038624492.1 → XP_038480420.1  CDKN2A-interacting protein isoform X2

    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD

  2. XM_038624493.1 → XP_038480421.1  CDKN2A-interacting protein isoform X3

    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD

  3. XM_038624491.1 → XP_038480419.1  CDKN2A-interacting protein isoform X1

    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD

  4. XM_038624494.1 → XP_038480422.1  CDKN2A-interacting protein isoform X4

    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049237.1 Alternate UU_Cfam_GSD_1.0

    Range
    47834077..47838409 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038560442.1 → XP_038416370.1  CDKN2A-interacting protein isoform X2

    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD

  2. XM_038560443.1 → XP_038416371.1  CDKN2A-interacting protein isoform X3

    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD

  3. XM_038560441.1 → XP_038416369.1  CDKN2A-interacting protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0N6Q3, A0A8C0QTZ6, A0A8I3P857
    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD

  4. XM_038560444.1 → XP_038416372.1  CDKN2A-interacting protein isoform X4

    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006598.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    47332264..47336599 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038452215.1 → XP_038308143.1  CDKN2A-interacting protein isoform X2

    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD

  2. XM_038452216.1 → XP_038308144.1  CDKN2A-interacting protein isoform X3

    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD

  3. XM_844869.6 → XP_849962.1  CDKN2A-interacting protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0SPQ4, A0A8P0NAD7
    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD

  4. XM_022404240.2 → XP_022259948.1  CDKN2A-interacting protein isoform X4

    Conserved Domains (1) summary
    pfam11952
    Location:19 → 120
    XTBD; XRN-Two Binding Domain, XTBD
Nucleotide Protein
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