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    PROK2 prokineticin 2 [ Homo sapiens (human) ]

    Gene ID: 60675, updated on 22-May-2013
    Official Symbol
    PROK2provided by HGNC
    Official Full Name
    prokineticin 2provided by HGNC
    Primary source
    HGNC:18455
    See related
    Ensembl:ENSG00000163421; HPRD:08446; MIM:607002; Vega:OTTHUMG00000158809
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    BV8; HH4; PK2; KAL4; MIT1
    Summary
    This gene encodes a protein expressed in the suprachiasmatic nucleus (SCN) circadian clock that may function as the output component of the circadian clock. The secreted form of the encoded protein may also serve as a chemoattractant for neuronal precursor cells in the olfactory bulb. Proteins from other vertebrates which are similar to this gene product were isolated based on homology to snake venom and secretions from frog skin, and have been shown to have diverse functions. Mutations in this gene are associated with Kallmann syndrome 4. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
    Location :
    3p13
    Sequence :
    Chromosome: 3; NC_000003.11 (71820806..71834357, complement)
    See PROK2 in Epigenomics, MapViewer

    Chromosome 3 - NC_000003.11Genomic Context describing neighboring genes Neighboring gene forkhead box P1 Neighboring gene FOXP1 intronic transcript 1 (non-protein coding) Neighboring gene eukaryotic translation initiation factor 4E family member 3 Neighboring gene G protein-coupled receptor 27 Neighboring gene long intergenic non-protein coding RNA 877 Neighboring gene coiled-coil domain containing 137 pseudogene Neighboring gene long intergenic non-protein coding RNA 870

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Kallmann syndrome 4

    Summary from GeneReviews: Kallmann Syndrome Go to GeneReviews

    Disease Characteristics
    Kallmann syndrome (KS) is characterized by the association of isolated GnRH deficiency (IGD) and anosmia (absent sense of smell). Infant boys often have micropenis and cryptorchidism. Adolescents and adults with IGD have clinical evidence of hypogonadism and incomplete sexual maturation on physical examination. Adult males with KS tend to have pre-pubertal testicular volume (i.e., <4 mL), absence of secondary sexual features (e.g., facial and axillary hair growth, deepening of the voice), decreased muscle mass, decreased bone densities, diminished libido, erectile dysfunction, and infertility. Adult females have little or no breast development and primary amenorrhea. Body habitus is usually eunuchoidal with arm span exceeding height by 5 cm or more. Although skeletal maturation is delayed, the rate of linear growth is usually normal (except for the absence of a distinct pubertal growth spurt). Individuals with anosmia may or may not be aware of their olfactory deficiency. Additional non-reproductive findings can include synkinesia of the digits, unilateral renal agenesis, sensorineural hearing loss, cleft lip and/or palate, agenesis of one or more teeth, brachydactyly, syndactyly, and agenesis of the corpus callosum.
    Diagnosis Testing
    The diagnosis of KS in adults is based on clinical findings, low or normal serum concentration of LH (luteinizing hormone) and FSH (follicle stimulating hormone) in the face of low circulating concentrations of sex steroids, normal pituitary and hypothalamus on MRI, and absence of other hypothalamic or pituitary abnormalities. Six genes have been definitely proven to be associated with KS to date: KAL1 (KS1), FGFR1 (KS2), PROKR2 (KS3), PROK2 (KS4), CHD7 (KS5), and FGF8 (KS6). Together, mutations in these six genes account for about 25%-35% of all KS. Deletion of KAL1 by FISH or CMA (chromosomal microarray) is an extremely rare cause of KS. Sequence analysis of KAL1 can identify KAL1 point mutations in 5%-10% of familial and simplex cases (i.e., a single occurrence in a family). Approximately 10% of individuals with KS have mutations in FGFR1, approximately 5% in PROKR2 or CHD7, and fewer than 5% in FGF8 or PROK2. Testing for KAL1, FGFR1, PROKR2, PROK2, and FGF8 is available on a clinical basis.
    Genetic Counseling
    KS1, caused by mutations in KAL1, is inherited in an X-linked manner. KS2 (FGFR1), KS3 (PROKR2), KS4 (PROK2), KS5 (CHD7), and KS6 (FGF8) are predominantly inherited in an autosomal dominant manner. KS3 (PROKR2) and KS4 (PROK2) can also be inherited in autosomal recessive manner. The mode of inheritance is often unclear within families and is likely to be dependent on mutation of more than one gene (i.e., digenic inheritance). Carrier testing for relatives at risk for X-linked and autosomal recessive KS and prenatal testing for pregnancies at increased risk for Kallmann syndrome1, 2, 3, 4, 5, or 6 (caused by mutations in KAL1, FGFR1, PROKR2, PROK2, CHD7, and FGF8 respectively) are possible if the disease-causing mutation has been identified in an affected relative.
    References
    • Class A/1 (Rhodopsin-like receptors), organism-specific biosystem (from REACTOME)
      Class A/1 (Rhodopsin-like receptors), organism-specific biosystemRhodopsin-like receptors (class A/1) are the largest group of GPCRs and are the best studied group from a functional and structural point of view. They show great diversity at the sequence level and ...
    • G alpha (q) signalling events, organism-specific biosystem (from REACTOME)
      G alpha (q) signalling events, organism-specific biosystemThe classic signalling route for G alpha (q) is activation of phospholipase C beta thereby triggering phosphoinositide hydrolysis, calcium mobilization and protein kinase C activation. This provides ...
    • GPCR downstream signaling, organism-specific biosystem (from REACTOME)
      GPCR downstream signaling, organism-specific biosystemG protein-coupled receptors (GPCRs) are classically defined as the receptor, G-protein and downstream effectors, the alpha subunit of the G-protein being the primary signaling molecule. However, it h...
    • GPCR ligand binding, organism-specific biosystem (from REACTOME)
      GPCR ligand binding, organism-specific biosystemThere are more than 800 G-protein coupled receptor (GPCRs) in the human genome, making it the largest receptor superfamily. GPCRs are also the largest class of drug targets, involved in virtually all...
    • Gastrin-CREB signalling pathway via PKC and MAPK, organism-specific biosystem (from REACTOME)
      Gastrin-CREB signalling pathway via PKC and MAPK, organism-specific biosystemGastrin is a hormone whose main function is to stimulate secretion of hydrochloric acid by the gastric mucosa, which results in gastrin formation inhibition. This hormone also acts as a mitogenic fac...
    • Peptide ligand-binding receptors, organism-specific biosystem (from REACTOME)
      Peptide ligand-binding receptors, organism-specific biosystemThese receptors, a subset of the Class A/1 (Rhodopsin-like) family, all bind peptide ligands which include the chemokines, opioids and somatostatins.
    • Signal Transduction, organism-specific biosystem (from REACTOME)
      Signal Transduction, organism-specific biosystemSignal transduction is a process in which extracellular signals elicit changes in cell state and activity. Transmembrane receptors sense changes in the cellular environment by binding ligands, such a...
    • Signaling by GPCR, organism-specific biosystem (from REACTOME)
      Signaling by GPCR, organism-specific biosystemG protein-coupled receptors (GPCRs; 7TM receptors; seven transmembrane domain receptors; heptahelical receptors; G protein-linked receptors [GPLR]) are the largest family of transmembrane receptors i...

    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    G-protein coupled receptor binding TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    G-protein coupled receptor signaling pathway NAS
    Non-traceable Author Statement
    more info
    PubMed 
    activation of MAPK activity TAS
    Traceable Author Statement
    more info
    PubMed 
    angiogenesis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cell proliferation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    chemotaxis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    circadian rhythm IEA
    Inferred from Electronic Annotation
    more info
     
    elevation of cytosolic calcium ion concentration TAS
    Traceable Author Statement
    more info
    PubMed 
    inflammatory response NAS
    Non-traceable Author Statement
    more info
    PubMed 
    negative regulation of apoptotic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    neuropeptide signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of smooth muscle contraction IDA
    Inferred from Direct Assay
    more info
    PubMed 
    sensory perception of pain TAS
    Traceable Author Statement
    more info
    PubMed 
    spermatogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    extracellular region TAS
    Traceable Author Statement
    more info
    PubMed 
    Preferred Names
    prokineticin-2
    Names
    prokineticin-2
    protein Bv8 homolog

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_008275.1 RefSeqGene

      Range
      5001..18552
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001126128.1NP_001119600.1  prokineticin-2 isoform a precursor

      Status: REVIEWED

      Description
      Transcript Variant: This variant (1) encodes the longer isoform (a).
      Source sequence(s)
      AC096970, BC098162
      Consensus CDS
      CCDS46868.1
      UniProtKB/Swiss-Prot
      Q9HC23
      Conserved Domains (1) summary
      pfam06607
      Location:23126
      Blast Score: 319
      Prokineticin; Prokineticin
    2. NM_021935.3NP_068754.1  prokineticin-2 isoform b precursor

      Status: REVIEWED

      Description
      Transcript Variant: This variant (2) lacks an alternate in-frame exon, compared to variant 1, resulting in a shorter protein (isoform b), compared to isoform a.
      Source sequence(s)
      AC096970, BC069395
      Consensus CDS
      CCDS2916.1
      UniProtKB/Swiss-Prot
      Q9HC23
      Related
      ENSP00000295618, OTTHUMP00000213530, ENST00000353065, OTTHUMT00000352301
      Conserved Domains (1) summary
      pfam06607
      Location:23105
      Blast Score: 337
      Prokineticin; Prokineticin

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000003.11 Reference GRCh37.p10 Primary Assembly

      Range
      71820806..71834357, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000135.1 Alternate HuRef

      Range
      71822789..71836340, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018914.1 Alternate CHM1_1.0

      Range
      71773730..71787277, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

      Supplemental Content

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