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Max MYC associated factor X [ Rattus norvegicus (Norway rat) ]

Gene ID: 60661, updated on 8-May-2016
Official Symbol
Maxprovided by RGD
Official Full Name
MYC associated factor Xprovided by RGD
Primary source
RGD:621101
See related
Ensembl:ENSRNOG00000008049
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus
Summary
human homolog is a transcriptional regulator that binds Myc [RGD, Feb 2006]
Orthologs
Location:
6q24
Exon count:
5
Annotation release Status Assembly Chr Location
105 current Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (99984258..100011457, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 6 NC_005105.3 (109378844..109403792, complement)

Chromosome 6 - NC_005105.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102546646 Neighboring gene uncharacterized LOC102546566 Neighboring gene farnesyltransferase, CAAX box, beta Neighboring gene 40S ribosomal protein S7-like Neighboring gene uncharacterized LOC102557550 Neighboring gene fucosyltransferase 8

Markers

Homology

Clone Names

  • MGC124611

Gene Ontology Provided by RGD

Process Evidence Code Pubs
cellular response to peptide hormone stimulus IEP
Inferred from Expression Pattern
more info
PubMed 
cellular response to starvation IEP
Inferred from Expression Pattern
more info
PubMed 
negative regulation of gene expression IDA
Inferred from Direct Assay
more info
PubMed 
neuron apoptotic process IEP
Inferred from Expression Pattern
more info
PubMed 
protein complex assembly IDA
Inferred from Direct Assay
more info
PubMed 
regulation of transcription from RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 
regulation of transcription from RNA polymerase II promoter ISO
Inferred from Sequence Orthology
more info
 
regulation of transcription, DNA-templated IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of transcription, DNA-templated ISO
Inferred from Sequence Orthology
more info
 
response to axon injury IEP
Inferred from Expression Pattern
more info
PubMed 
response to insulin IEP
Inferred from Expression Pattern
more info
PubMed 
response to organonitrogen compound IEP
Inferred from Expression Pattern
more info
PubMed 
retina development in camera-type eye IEP
Inferred from Expression Pattern
more info
PubMed 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
MLL1 complex ISO
Inferred from Sequence Orthology
more info
 
MLL1 complex ISS
Inferred from Sequence or Structural Similarity
more info
 
PML body IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasm ISO
Inferred from Sequence Orthology
more info
 
dendrite IDA
Inferred from Direct Assay
more info
PubMed 
nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus ISO
Inferred from Sequence Orthology
more info
 
Preferred Names
protein max
Names
myc-associated factor X

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_022210.1NP_071546.1  protein max

    See identical proteins and their annotated locations for NP_071546.1

    Status: PROVISIONAL

    Source sequence(s)
    D14447
    UniProtKB/Swiss-Prot
    P52164
    Related
    ENSRNOP00000072268, ENSRNOT00000083286
    Conserved Domains (1) summary
    cd00083
    Location:2379
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 105 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005105.4 Reference Rnor_6.0 Primary Assembly

    Range
    99984258..100011457 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006240248.2XP_006240310.1  

    See identical proteins and their annotated locations for XP_006240310.1

    UniProtKB/Swiss-Prot
    P52164
    Related
    ENSRNOP00000040275, ENSRNOT00000041442
    Conserved Domains (1) summary
    cd00083
    Location:1270
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
  2. XM_008764846.1XP_008763068.1  

    See identical proteins and their annotated locations for XP_008763068.1

    Conserved Domains (1) summary
    cd00083
    Location:2379
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...

RNA

  1. XR_593085.1 RNA Sequence

  2. XR_593084.1 RNA Sequence

Alternate Rn_Celera

Genomic

  1. AC_000074.1 Alternate Rn_Celera

    Range
    94056185..94080083 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)