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    CG18754 [ Drosophila melanogaster ]

    Gene ID: 59145, updated on 9-May-2012
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    Summary

    Official Symbol
    CG18754provided by Flybase
    Primary source
    FLYBASE:FBgn0042106
    Locus tag
    Dmel_CG18754
    Gene type
    protein coding
    RNA name
    CG18754
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG18754; SP61
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    Genomic context

    Location :
    95A7-95A7
    Sequence :
    Chromosome: 3R; NT_033777.2 (19509779..19512259)
    See CG18754 in Epigenomics, MapViewer

    Chromosome 3R - NT_033777.2Genomic Context describing neighboring genes Neighboring gene Eukaryotic initiation factor 3 p66 subunit Neighboring gene CG16710 gene product from transcript CG16710-RB Neighboring gene Spatzle-Processing Enzyme Neighboring gene CG10254 gene product from transcript CG10254-RB Neighboring gene CG10252 gene product from transcript CG10252-RA

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Sequence finishing and mapping of Drosophila melanogaster heterochromatin. Hoskins RA, et al. Science, 2007 Jun 15. PMID 17569867.
    2. The Release 5.1 annotation of Drosophila melanogaster heterochromatin. Smith CD, et al. Science, 2007 Jun 15. PMID 17569856.
    3. Paucity of chimeric gene-transposable element transcripts in the Drosophila melanogaster genome. Lipatov M, et al. BMC Biol, 2005 Nov 12. PMID 16283942.
    4. Combined evidence annotation of transposable elements in genome sequences. Quesneville H, et al. PLoS Comput Biol, 2005 Jul. PMID 16110336.
    5. A Drosophila protein-interaction map centered on cell-cycle regulators. Stanyon CA, et al. Genome Biol, 2004. PMID 15575970.

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:72816 BioGRID:63867 CG11486    BioGRID  PubMed Two-hybrid 
    BioGRID:72816 BioGRID:62713 CG5009    BioGRID  PubMed Two-hybrid 
    BioGRID:72816 BioGRID:66526 Csk    BioGRID  PubMed Two-hybrid 
    BioGRID:72816 BioGRID:59912 His3.3A    BioGRID  PubMed Two-hybrid 
    BioGRID:72816 BioGRID:66726 Lip3    BioGRID  PubMed Two-hybrid 
    BioGRID:72816 BioGRID:59479 MED15    BioGRID  PubMed Two-hybrid 
    BioGRID:72816 BioGRID:65211 Rbp6    BioGRID  PubMed Two-hybrid 
    BioGRID:72816 BioGRID:60577 Stam    BioGRID  PubMed Two-hybrid 
    BioGRID:72816 BioGRID:64788 ara    BioGRID  PubMed Two-hybrid 
    BioGRID:72816 BioGRID:60833 cenG1A    BioGRID  PubMed Two-hybrid 
    BioGRID:72816 BioGRID:62866 ena    BioGRID  PubMed Two-hybrid 
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    General gene information

    mobile_element

    • Loc: 19510474-19510901 mobile_element_type = transposon:roo{}1410

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    serine-type endopeptidase activity NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    proteolysis NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
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    General protein information

    Preferred Names
    CG18754 gene product from transcript CG18754-RB
    Names
    CG18754
    CG18754-PB
    NP_652652.3
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.2

      Range
      19509779..19512259
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_144395.5 → NP_652652.3  CG18754 [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9I7I1
      Conserved Domains (2) summary
      cd00190
      Location:108 – 338
      Blast Score: 365
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
      cl02731
      Location:35 – 84
      Blast Score: 88
      CLIP; Regulatory CLIP domain of proteinases
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AE014297.2 AAG22168.3
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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