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    sufS cysteine desulfurase [ Chlamydia trachomatis L2b/UCH-1/proctitis ]

    Gene ID: 5859446, updated on 15-Jun-2013
    Gene symbol
    sufS
    Gene description
    cysteine desulfurase
    Locus tag
    CTLon_0056
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Chlamydia trachomatis L2b/UCH-1/proctitis (strain: UCH-1, serotype: L2)
    Lineage
    Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia
    Sequence :
    NC_010280.2 (68494..69699)

    NC_010280.2Genomic Context describing neighboring genes Neighboring gene cysteine desulfurase activator complex subunit SufB Neighboring gene ABC transporter ATP-binding protein Neighboring gene hypothetical protein Neighboring gene putative chromosome partitioning protein Neighboring gene ABC transporter ATPase Neighboring gene ABC transporter ATPase

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Chlamydia trachomatis: genome sequence analysis of lymphogranuloma venereum isolates. Thomson NR, et al. Genome Res, 2008 Jan. PMID 18032721.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction

    Miscellaneous features

    • Loc: 68548-69657 HMMPfam hit to PF00266, Aminotransferase class-V,score 3.2e-197 inference = protein motif:HMMPfam:PF00266
    • Loc: 68686-69420 HMMPfam hit to PF01212, Beta-eliminating lyase,score 0.0031 inference = protein motif:HMMPfam:PF01212
    • Loc: 69121-69180 PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site inference = protein motif:Prosite:PS00595
    Names
    cysteine desulfurase

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_010280.2

      Range
      68494..69699
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_001653159.1 cysteine desulfurase [Chlamydia trachomatis L2b/UCH-1/proctitis]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B0BAE2
      Conserved Domains (2) summary
      cd06453
      Location:19 – 392
      Blast Score: 1086
      SufS_like; Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS ...
      COG0520
      Location:1 – 398
      Blast Score: 1136
      csdA; Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
    Nucleotide Protein
    Heading Accession and Version
    genomic AM884177.2 CAP06454.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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