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    LOC578192 uncharacterized LOC578192 [ Strongylocentrotus purpuratus ]

    Gene ID: 578192, updated on 4-Feb-2012
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    Summary

    Gene symbol
    LOC578192
    Gene description
    uncharacterized LOC578192
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Strongylocentrotus purpuratus
    Lineage
    Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus
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    Genomic context

    See LOC578192 in MapViewer

    NW_001312390.1Genomic Context describing neighboring genes Neighboring gene similar to cathepsin l Neighboring gene uncharacterized LOC581313 Neighboring gene uncharacterized LOC591412

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    General gene information

    Homology

    • Homologs of the LOC578192 gene: The LOC578192 gene is conserved in human, chimpanzee, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, A.thaliana, rice, and P.falciparum.

    Pathways from BioSystems

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    General protein information

    Names
    uncharacterized LOC578192
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    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Build 2.1

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly (based on Spur_v2.1)

    Genomic

    1. NW_001312390.1

      Range
      139414..145720, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_778380.2 → XP_783473.1  

      Conserved Domains (3) summary
      PTZ00428
      Location:4 – 354
      Blast Score: 1193
      PTZ00428; 60S ribosomal protein L4; Provisional
      pfam14374
      Location:277 – 356
      Blast Score: 247
      Ribos_L4_asso_C; 60S ribosomal protein L4 C-terminal domain
      cl00325
      Location:10 – 267
      Blast Score: 575
      Ribosomal_L4; Ribosomal protein L4/L1 family

    Alternate assembly (based on NCBI's super-scaffold of Spur_v2.1)

    Genomic

    1. NW_001466717.1

      Range
      21773..28079
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001190853.1 → XP_001190853.1  

      Conserved Domains (3) summary
      PTZ00428
      Location:4 – 354
      Blast Score: 1193
      PTZ00428; 60S ribosomal protein L4; Provisional
      pfam14374
      Location:277 – 356
      Blast Score: 247
      Ribos_L4_asso_C; 60S ribosomal protein L4 C-terminal domain
      cl00325
      Location:10 – 267
      Blast Score: 575
      Ribosomal_L4; Ribosomal protein L4/L1 family
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AAGJ02112716.1 (533..6839) None
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    Additional Links

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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